RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 E7EQL1 145 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 RNF223E7ERA6 249 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 PTP4A3O75365 173 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 NDUFB2O95178 105 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 CD8AP01732 235 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 TSPAN19P0C672 248 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 SLC6A6P31641 620 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 TTKP33981 857 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 ACVR1BP36896 505 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 FXYD6P3P58550 94 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 PRPS1P60891 318 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 CDC42P60953 191 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 CDK5Q00535 292 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 FHL1Q13642 323 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 C12orf73Q69YU5 71 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 NIPAL3Q6P499 406 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 CREB3L2Q70SY1 520 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 THAP5Q7Z6K1 395 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 FBXL14Q8N1E6 418 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 WDR31Q8NA23 367 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 OR2T33Q8NG76 320 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 ADAD1Q96M93 576 aaKnown RBP15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 GPX7Q96SL4 187 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 DHRS9Q9BPW9 319 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 MRPL39Q9NYK5 338 aaKnown RBP15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 BAIAP2Q9UQB8 552 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 ATP23Q9Y6H3 246 aa15.74■□□□□ 0.11
SQSTM1-204ENST00000453046 OR6C65A6NJZ3 312 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 ZNF587BE7ETH6 402 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 LRRN3E7EW58 273 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 NDUFS7O75251 213 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 CLIC3O95833 236 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 IGHV4-39P01824 125 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 IGFBP1P08833 259 aaPredicted RBP15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 SELENOPP49908 381 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 FABP6P51161 128 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 P2RY4P51582 365 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 MUC15Q8N387 334 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 ADPRHL1Q8NDY3 354 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 OR5J2Q8NH18 312 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 OR51A7Q8NH64 312 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 FAM81AQ8TBF8 368 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 SAMD8Q96LT4 415 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 TSSK6Q9BXA6 273 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 ASPNQ9BXN1 380 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 CBLN4Q9NTU7 201 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 IMPAD1Q9NX62 359 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 GDF2Q9UK05 429 aaPredicted RBP15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 B3GALT5Q9Y2C3 310 aa15.73■□□□□ 0.11
SQSTM1-204ENST00000453046 ZANQ9Y493 2812 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 MPZL2O60487 215 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 HIST1H2ABP04908 130 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 ZNF43P17038 809 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 GRPRP30550 384 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 GRK5P34947 590 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 GIPRP48546 466 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 TEKQ02763 1124 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 GINS1Q14691 196 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 HIKESHIQ53FT3 197 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 C1QTNF12Q5T7M4 302 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 HIST3H2AQ7L7L0 130 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 KDM8Q8N371 416 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 IQCF1Q8N6M8 205 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 LRRC17Q8N6Y2 441 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 MAPK1IP1LQ8NDC0 245 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 OR4Q3Q8NH05 313 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 FBLIM1Q8WUP2 373 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 HIST1H2ACQ93077 130 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 ALKBH3Q96Q83 286 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 SLC38A2Q96QD8 506 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 NR1H4Q96RI1 486 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 TNFRSF13CQ96RJ3 184 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 CACNG6Q9BXT2 260 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 REG4Q9BYZ8 158 aa15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 FN1P02751 2386 aaKnown RBP15.72■□□□□ 0.11
SQSTM1-204ENST00000453046 INAFM1C9JVW0 142 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 M0R082 166 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 BHLHE40O14503 412 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 SSX4O60224 188 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 HMGN1P05114 100 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 NUDT6P53370 316 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 UBE2NP61088 152 aaKnown RBP15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 ISL1P61371 349 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 IL5RAQ01344 420 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 C1DQ13901 141 aaKnown RBP15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 RAB35Q15286 201 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 CLEC12AQ5QGZ9 265 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 TMEM236Q5W0B7 351 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 ZNF544Q6NX49 715 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 THSD4Q6ZMP0 1018 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 LNX2Q8N448 690 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 ZNF417Q8TAU3 575 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 TRUB1Q8WWH5 349 aaKnown RBP15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 ZNF587Q96SQ5 575 aaPredicted RBP15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 UBAP1Q9NZ09 502 aa15.71■□□□□ 0.11
SQSTM1-204ENST00000453046 ABCA2Q9BZC7 2435 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 BMP4P12644 408 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 APEHP13798 732 aaKnown RBP15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 CLDN17P56750 224 aa15.7■□□□□ 0.1
SQSTM1-204ENST00000453046 RPL18Q07020 188 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms