RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 NXNL2Q5VZ03 156 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 C22orf34Q6ZV56 151 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 CXXC5Q7LFL8 322 aaKnown RBP11.44□□□□□ -0.58
VPS33A-202ENST00000451053 ACBD4Q8NC06 268 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 SLC37A3Q8NCC5 494 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 SDR9C7Q8NEX9 313 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 OR1K1Q8NGR3 316 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 LINC01560Q8TB33 94 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 FNDC8Q8TC99 324 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 UBE2FQ969M7 185 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 S100PBPQ96BU1 408 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 NMNAT3Q96T66 252 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 ACTR6Q9GZN1 396 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 PLCXD1Q9NUJ7 323 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 VSX1Q9NZR4 365 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-202ENST00000451053 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.44□□□□□ -0.58
VPS33A-202ENST00000451053 TPRKBQ9Y3C4 175 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 FLNCQ14315 2725 aa11.44□□□□□ -0.58
VPS33A-202ENST00000451053 HELZ2Q9BYK8 2649 aaKnown RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 CIB4A0PJX0 185 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 IRGMA1A4Y4 181 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF99A8MXY4 864 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 M0R129 80 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 SLC1A7O00341 560 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 PRODHO43272 600 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 DHHO43323 396 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 FAM20BO75063 409 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 COL8A1P27658 744 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF133P52736 654 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 GABARAPL2P60520 117 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 KCTD21Q4G0X4 260 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF362Q5T0B9 420 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 C10orf128Q5T292 105 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 LCN1P1Q5VSP4 162 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 PLBD1Q6P4A8 553 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 LEG1Q6P5S2 330 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 DNM1P34Q6PK57 102 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 SLC25A47Q6Q0C1 308 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 MEX3BQ6ZN04 569 aaKnown RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 CPOQ8IVL8 374 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 DMRTC2Q8IXT2 367 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 STEAP2Q8NFT2 490 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 APH1BQ8WW43 257 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 NSMAFQ92636 917 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 HTRA1Q92743 480 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 BCL2L2Q92843 193 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 OTULINQ96BN8 352 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 WFIKKN1Q96NZ8 548 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 RBP7Q96R05 134 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 HDHD5Q9BXW7 423 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 SYT4Q9H2B2 425 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 NELFAQ9H3P2 528 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 CCNB1IP1Q9NPC3 277 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 HINT3Q9NQE9 182 aaKnown RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 DNAJC27Q9NZQ0 273 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 PLEKHB1Q9UF11 243 aaPredicted RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 RPL36Q9Y3U8 105 aaKnown RBP11.43□□□□□ -0.58
VPS33A-202ENST00000451053 UGT2A1Q9Y4X1 527 aa11.43□□□□□ -0.58
VPS33A-202ENST00000451053 A0A096LPE4 126 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 A0A1W2PPZ6 126 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 A0A1W2PR80 420 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 MAGEA13PA6NCF6 341 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 OR6C68A6NDL8 312 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 EFCAB10A6NFE3 127 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 SLC22A31A6NKX4 558 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 DCTN6O00399 190 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 ENTPD6O75354 484 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 B4GALT1P15291 398 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 CTLA4P16410 223 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 FMO3P31513 532 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 CENPAP49450 140 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 SLC25A1P53007 311 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 CDH11P55287 796 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 SH3BGRP55822 239 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-202ENST00000451053 TGFBR3Q03167 851 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 STK11Q15831 433 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 ETFDHQ16134 617 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 HIKESHIQ53FT3 197 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 SLC35D3Q5M8T2 416 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 THEM4Q5T1C6 240 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 AADACL4Q5VUY2 407 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 KLHL24Q6TFL4 600 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 CYB561A3Q8NBI2 242 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 NPEPL1Q8NDH3 523 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 C1orf162Q8NEQ5 155 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-202ENST00000451053 BPIFB6Q8NFQ5 453 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 OR2T4Q8NH00 348 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 IPCEF1Q8WWN9 437 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-202ENST00000451053 ZC3HAV1LQ96H79 300 aaKnown RBP11.42□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF582Q96NG8 517 aaPredicted RBP11.42□□□□□ -0.58
VPS33A-202ENST00000451053 TSSK2Q96PF2 358 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 DDOQ99489 341 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 FOXB1Q99853 325 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF696Q9H7X3 374 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 RPRD1BQ9NQG5 326 aaKnown RBP11.42□□□□□ -0.58
VPS33A-202ENST00000451053 TMEM38BQ9NVV0 291 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 WARS2Q9UGM6 360 aaKnown RBP11.42□□□□□ -0.58
VPS33A-202ENST00000451053 PCDHGB5Q9Y5G0 923 aa11.42□□□□□ -0.58
VPS33A-202ENST00000451053 FASNP49327 2511 aaKnown RBP11.41□□□□□ -0.58
VPS33A-202ENST00000451053 TUBAL3A6NHL2 446 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms