RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SYT4Q9H2B2 425 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 SPACA1Q9HBV2 294 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 OR2S2Q9NQN1 319 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 UBQLN4Q9NRR5 601 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 HAO2Q9NYQ3 351 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 LAMP5Q9UJQ1 280 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 FRMPD3Q5JV73 1810 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 TRAV18A0A075B6X5 111 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 TBC1D3BA6NDS4 549 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 PRAMEF26H0Y7S4 382 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 M0QYG6 137 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 PSMD9O00233 223 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 OR2C1O95371 312 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 PLGP00747 810 aaPredicted RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 THY1P04216 161 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 SFTPBP07988 381 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 MMP3P08254 477 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 OR8U9P0C7N5 309 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 TBC1D3HP0C7X1 549 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 LIPCP11150 499 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 ATP1B2P14415 290 aaPredicted RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 FABP4P15090 132 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 ZNF25P17030 456 aaPredicted RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 FUT1P19526 365 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 PSMB10P40306 273 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 SLC6A9P48067 706 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 GNG10P50151 68 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 RAB1AP62820 205 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 EIF5AP63241 154 aaKnown RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 SSBP1Q04837 148 aaKnown RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 TSTA3Q13630 321 aaPredicted RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 CRMP1Q14194 572 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 GFI1BQ5VTD9 330 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 TBC1D3GQ6DHY5 549 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 ANKRD16Q6P6B7 361 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 TMEM205Q6UW68 189 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 STAC2Q6ZMT1 411 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 LYG2Q86SG7 212 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 ZNF280BQ86YH2 543 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 ZSCAN4Q8NAM6 433 aaPredicted RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 CYB561A3Q8NBI2 242 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 OR10AD1Q8NGE0 317 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 OR2A12Q8NGT7 310 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 OR8U1Q8NH10 309 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 MVB12AQ96EY5 273 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 BSCL2Q96G97 398 aaPredicted RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 YPEL4Q96NS1 127 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 CD180Q99467 661 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 PHB2Q99623 299 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 RIMS4Q9H426 269 aaPredicted RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 PARP11Q9NR21 331 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 ZCCHC3Q9NUD5 404 aaKnown RBP7.83□□□□□ -1.16
LSM5-208ENST00000450169 SH2B3Q9UQQ2 575 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 HDGFL3Q9Y3E1 203 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 DOCK3Q8IZD9 2030 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 DOCK6Q96HP0 2047 aa7.83□□□□□ -1.16
LSM5-208ENST00000450169 FAM221AA4D161 298 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 MBLAC1A4D2B0 266 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 OR1F1O43749 312 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 CTAG2O75638 210 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 ADAP1O75689 374 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 WNT11O96014 354 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 CATP04040 527 aaKnown RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 THBS1P07996 1170 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 SGSHP51688 502 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 RPS23P62266 143 aaKnown RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 RPP30P78346 268 aaKnown RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 TAF10Q12962 218 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 SCGB2B2Q4G0G5 96 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 ZNF529Q6P280 563 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 RANBP3LQ86VV4 465 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 TMEM173Q86WV6 379 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 VRK2Q86Y07 508 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 MITD1Q8WV92 249 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 MOAP1Q96BY2 351 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 OR52A5Q9H2C5 316 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 RHBGQ9H310 441 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 CRLF2Q9HC73 371 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 SIDT1Q9NXL6 827 aaKnown RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 CALML5Q9NZT1 146 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 KCNG2Q9UJ96 466 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 SLC7A7Q9UM01 511 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 ZNF281Q9Y2X9 895 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 PRG3Q9Y2Y8 225 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 GOLT1BQ9Y3E0 138 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 TMED3Q9Y3Q3 217 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 SLC5A10A0PJK1 596 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 C5orf51A6NDU8 294 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 NPIPB15A6NHN6 443 aaPredicted RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 ZNF724A8MTY0 619 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 UMAD1C9J7I0 102 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 PHOX2AO14813 284 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 SPINT1O43278 529 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BKO60814 126 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 MTX2O75431 263 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 SLCO2B1O94956 709 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 VNN2O95498 520 aa7.82□□□□□ -1.16
LSM5-208ENST00000450169 CRYABP02511 175 aaKnown RBP7.82□□□□□ -1.16
LSM5-208ENST00000450169 HIST1H2BJP06899 126 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms