RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 FAM157CP0CG43 387 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 POU1F1P28069 291 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 APOBEC3AP31941 199 aaPredicted RBP11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 PTDSS1P48651 473 aaKnown RBP11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 SLC9A3P48764 834 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 ALDH3A2P51648 485 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 EFNA4P52798 201 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 TOP3AQ13472 1001 aaPredicted RBP11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 MFSD13AQ14CX5 517 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 CLEC12AQ5QGZ9 265 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 C6orf52Q5T4I8 152 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 TMEM236Q5W0B7 351 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 RASSF6Q6ZTQ3 369 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 GPAT4Q86UL3 456 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 SCAIQ8N9R8 606 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 WDR31Q8NA23 367 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 OR4Q3Q8NH05 313 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 FAM168AQ92567 244 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 TXNDC15Q96J42 360 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 MBOAT4Q96T53 435 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 KCNK17Q96T54 332 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 RBM4BQ9BQ04 359 aaKnown RBP11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 RBM4Q9BWF3 364 aaKnown RBP11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 RIBC2Q9H4K1 309 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 SLC17A5Q9NRA2 495 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 POFUT2Q9Y2G5 429 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 ADAM18Q9Y3Q7 739 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 ATP23Q9Y6H3 246 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 CDH10Q9Y6N8 788 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 MALRD1Q5VYJ5 2156 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 HTR3EA5X5Y0 456 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 DLGAP1O14490 977 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 RNF13O43567 381 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 TRAF3IP2O43734 574 aaPredicted RBP11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 NDUFB2O95178 105 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 OR6A2O95222 327 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 WNT11O96014 354 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 OSMP13725 252 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 GSTM3P21266 225 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 MPGP29372 298 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 RPL4P36578 427 aaKnown RBP11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 CTXN1P60606 82 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 PRPS1P60891 318 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 ERVK-25P63136 954 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 POU3F1Q03052 451 aaPredicted RBP11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 PUDPQ08623 228 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 DBPQ10586 325 aaPredicted RBP11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 MELKQ14680 651 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 SLC17A1Q14916 467 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 ALG10Q5BKT4 473 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 CYB5R2Q6BCY4 276 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 TMEM225Q6GV28 225 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 SMARCD3Q6STE5 483 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 CASP12Q6UXS9 341 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 CD300LDQ6UXZ3 194 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 OR9K2Q8NGE7 335 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 BOD1Q96IK1 185 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 OXGR1Q96P68 337 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 ZNF385AQ96PM9 386 aaKnown RBP11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 KATNB1Q9BVA0 655 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 SF3B5Q9BWJ5 86 aaKnown RBP11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 TSSK6Q9BXA6 273 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 C1QTNF6Q9BXI9 259 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 BEX2Q9BXY8 128 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 TOR3AQ9H497 397 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 TBC1D23Q9NUY8 699 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 MED29Q9NX70 200 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 LPAR3Q9UBY5 353 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 FLVCR1Q9Y5Y0 555 aa11.98□□□□□ -0.49
PDLIM2-213ENST00000448520 A0A1W2PR80 420 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 H3BN98 237 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 M0R129 80 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 F12P00748 615 aaPredicted RBP11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 IFNGR1P15260 489 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 THBS2P35442 1172 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 AQP4P55087 323 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 ZP4Q12836 540 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 RFX4Q33E94 735 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 NHLRC1Q6VVB1 395 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 ABHD12BQ7Z5M8 362 aaPredicted RBP11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 UEVLDQ8IX04 471 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 ZIC4Q8N9L1 334 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 POMGNT2Q8NAT1 580 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 ADPRHL1Q8NDY3 354 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 TMEM45BQ96B21 275 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 EMC6Q9BV81 110 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 IFT27Q9BW83 186 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 OBP2BQ9NPH6 170 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 INIPQ9NRY2 104 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 SLC7A10Q9NS82 523 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 RASD1Q9Y272 281 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 IER3IP1Q9Y5U9 82 aa11.97□□□□□ -0.49
PDLIM2-213ENST00000448520 IMPA2O14732 288 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 USF1P22415 310 aaPredicted RBP11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 SLC6A6P31641 620 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 CRISP1P54107 249 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 FOXG1P55316 489 aaPredicted RBP11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 CLDN17P56750 224 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 RUNX1T1Q06455 604 aa11.96□□□□□ -0.49
PDLIM2-213ENST00000448520 LGALS3BPQ08380 585 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms