RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CMBLQ96DG6 245 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 AKIRIN1Q9H9L7 192 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-202ENST00000448238 SRPK3Q9UPE1 567 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 TEX264Q9Y6I9 313 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 MS4A18H0YCH9 400 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 OR2J2O76002 312 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 CD37P11049 281 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 GDNFP39905 211 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 MDH2P40926 338 aaKnown RBP8.29□□□□□ -1.08
NIPBL-202ENST00000448238 PIGFQ07326 219 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 MS4A18Q3C1V0 323 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF468Q5VIY5 522 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-202ENST00000448238 C12orf54Q6X4T0 127 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 FADS6Q8N9I5 356 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 RHOXF1Q8NHV9 184 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 NAA60Q9H7X0 242 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 GPR55Q9Y2T6 319 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-202ENST00000448238 RCCD1A6NED2 376 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 CLDN24A6NM45 220 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 ACOT8O14734 319 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 MELTFP08582 738 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 FCGR2AP12318 317 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 CD46P15529 392 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 HIST1H1CP16403 213 aaKnown RBP8.29□□□□□ -1.08
NIPBL-202ENST00000448238 GM2AP17900 193 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF93P35789 620 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-202ENST00000448238 GNB1P62873 340 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 VEZF1Q14119 521 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM182Q6ZP80 229 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-202ENST00000448238 ADGRE4PQ86SQ3 457 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 OR5AP2Q8NGF4 316 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 HAS1Q92839 578 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 CYB5R1Q9UHQ9 305 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 IER3IP1Q9Y5U9 82 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 AP4M1O00189 453 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 GUSBP08236 651 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 SLC25A4P12235 298 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 GALR1P47211 349 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 AMIGO3Q86WK7 504 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 L3HYPDHQ96EM0 354 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 OR51B6Q9H340 312 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 PADI1Q9ULC6 663 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 CORTO00230 105 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 HSPB6O14558 160 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 RAD1O60671 282 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 GGT5P36269 586 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 CCL23P55773 120 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 C9orf152Q5JTZ5 239 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 C2CD4AQ8NCU7 369 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-202ENST00000448238 ISG20Q96AZ6 181 aaKnown RBP8.29□□□□□ -1.08
NIPBL-202ENST00000448238 GRAMD2BQ96HH9 432 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 FBXL17Q9UF56 701 aa8.29□□□□□ -1.08
NIPBL-202ENST00000448238 ABHD16AO95870 558 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 PBX1P40424 430 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 FOLR3P41439 243 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 LILRA4P59901 499 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 RPS23P62266 143 aaKnown RBP8.28□□□□□ -1.08
NIPBL-202ENST00000448238 OR2B11Q5JQS5 317 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 GRASPQ7Z6J2 395 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-202ENST00000448238 EDARADDQ8WWZ3 215 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 GALMQ96C23 342 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 OR8B4Q96RC9 309 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 LIPGQ9Y5X9 500 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 GABRPO00591 440 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 OR4E1P0C645 316 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 HINT1P49773 126 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-202ENST00000448238 NOVA1P51513 510 aaKnown RBP8.28□□□□□ -1.08
NIPBL-202ENST00000448238 EDDM3BP56851 147 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 GRAMD2AQ8IUY3 354 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 RNF113BQ8IZP6 322 aaKnown RBP8.28□□□□□ -1.08
NIPBL-202ENST00000448238 KREMEN2Q8NCW0 462 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 SORBS1Q9BX66 1292 aaKnown RBP8.28□□□□□ -1.08
NIPBL-202ENST00000448238 WASHC3Q9Y3C0 194 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 KIF1AQ12756 1690 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 PCBP4P57723 403 aaKnown RBP8.28□□□□□ -1.08
NIPBL-202ENST00000448238 WDR5P61964 334 aaKnown RBP8.28□□□□□ -1.08
NIPBL-202ENST00000448238 PPP1CAP62136 330 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 LINC00299Q6ZSB3 139 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 VRK3Q8IV63 474 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 GABRG1Q8N1C3 465 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 SCCPDHQ8NBX0 429 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 OR10D4PQ8NGN7 298 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 ZFYVE21Q9BQ24 234 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 KCNQ2O43526 872 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 SSSCA1O60232 199 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 MGMTP16455 207 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 C21orf33P30042 268 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-202ENST00000448238 GNG4P50150 75 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 MLF1P58340 268 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 PCLAFQ15004 111 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 OR7A5Q15622 319 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 BCL7AQ4VC05 210 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF813Q6ZN06 617 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 LRRC55Q6ZSA7 311 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 WDR18Q9BV38 432 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 CSAG2Q9Y5P2 127 aa8.28□□□□□ -1.08
NIPBL-202ENST00000448238 TRAV34A0A0B4J273 112 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms