RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CTSFQ9UBX1 484 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CD300AQ9UGN4 299 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 RSPH14Q9UHP6 348 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CDH10Q9Y6N8 788 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 RAB19A4D1S5 217 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 CENPXA8MT69 81 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 IQCF5A8MTL0 148 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 A8MX80 341 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 CDX4O14627 284 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 MRPS12O15235 138 aaKnown RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF254O75437 659 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 E2F6O75461 281 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACSM4P0C7M7 580 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ATP6V1B2P21281 511 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 IL2RGP31785 369 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 NBL1P41271 181 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 GPR1P46091 355 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ATP5J2P56134 94 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF33AQ06730 810 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 FCHO2Q0JRZ9 810 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 TRAM2Q15035 370 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 VAMP3Q15836 100 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 PGGHGQ32M88 737 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 VAX1Q5SQQ9 334 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 C1orf94Q6P1W5 598 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 NDUFAF7Q7L592 441 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ARCQ7LC44 396 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF546Q86UE3 836 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 PPP1R27Q86WC6 154 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 C17orf82Q86X59 251 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 RDH10Q8IZV5 341 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 PUSL1Q8N0Z8 303 aaKnown RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF557Q8N988 423 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 CCDC26Q8TAB7 109 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 TCP10LQ8TDR4 215 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ITLN1Q8WWA0 313 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 NEIL2Q969S2 332 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ISOC2Q96AB3 205 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 DUS3LQ96G46 650 aaKnown RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 C1orf147Q96MC9 270 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACBD6Q9BR61 282 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 CFAP74Q9C0B2 1584 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 DMAP1Q9NPF5 467 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF302Q9NR11 478 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 KCNIP1Q9NZI2 227 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 DPM3Q9P2X0 92 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 LGALS13Q9UHV8 139 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ING4Q9UNL4 249 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 DIP2CQ9Y2E4 1556 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 C15orf41Q9Y2V0 281 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 YARS2Q9Y2Z4 477 aaKnown RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 NUP153P49790 1475 aaKnown RBP3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 BCL9LQ86UU0 1499 aa3.4□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZNF142P52746 1687 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ABCC1P33527 1531 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 BLMP54132 1417 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 MIA2Q96PC5 1412 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 TRAV9-2A0A087WT02 112 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 A0A0G2JRQ6 117 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 GLYATL1P3A0A0U1RQE8 302 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 USP27XA6NNY8 438 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 SCAMP2O15127 329 aaKnown RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 MGRN1O60291 552 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 GMDSO60547 372 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 IGLL1P15814 213 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 TCN1P20061 433 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC26A3P40879 764 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 AQP2P41181 271 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACTA2P62736 377 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACTG2P63267 376 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACTC1P68032 377 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ACTA1P68133 377 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 TSC22D1Q15714 1073 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 SLC1A5Q15758 541 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 GABRA6Q16445 453 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 AANATQ16613 207 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 RPEL1Q2QD12 228 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 C18orf21Q32NC0 220 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 TIGD3Q6B0B8 471 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 CXCL17Q6UXB2 119 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 DNM1P46Q6ZS02 220 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 PID1Q7Z2X4 250 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ERO1BQ86YB8 467 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 CD302Q8IX05 232 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ZBED8Q8IZ13 594 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 PRELID2Q8N945 189 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ANGPTL6Q8NI99 470 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 PDCD6IPQ8WUM4 868 aaKnown RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 CHCHD10Q8WYQ3 142 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ITCHQ96J02 903 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 CHID1Q9BWS9 393 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 SELENOIQ9C0D9 397 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 OR52A5Q9H2C5 316 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 ADNPQ9H2P0 1102 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 MRPL47Q9HD33 250 aaKnown RBP3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 AGPAT4Q9NRZ5 378 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 NRBP2Q9NSY0 501 aa3.39□□□□□ -1.87
HMGB1P48-201ENST00000446155 DHRS4-AS1Q9P1J3 65 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms