RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 ANKRD16Q6P6B7 361 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 Q6ZSR6 202 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 HSD17B13Q7Z5P4 300 aaPredicted RBP12.86□□□□□ -0.35
ERCC3-203ENST00000445889 MARCH3Q86UD3 253 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 BEST3Q8N1M1 668 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 SCARF2Q96GP6 870 aaPredicted RBP12.86□□□□□ -0.35
ERCC3-203ENST00000445889 DGAT2Q96PD7 388 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 ADOQ96SZ5 270 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 ZNF416Q9BWM5 594 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 MMP25Q9NPA2 562 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 B9D1Q9UPM9 204 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 PLEKHA6Q9Y2H5 1048 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 TMEM184BQ9Y519 407 aaPredicted RBP12.86□□□□□ -0.35
ERCC3-203ENST00000445889 ETV7Q9Y603 341 aa12.86□□□□□ -0.35
ERCC3-203ENST00000445889 TRBV5-5A0A0J9YX44 114 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 NPIPB9F8W1W9 429 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 LMX1BO60663 402 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 KCNJ13O60928 360 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 LDOC1O95751 146 aaPredicted RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 SPARCP09486 303 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 TACR3P29371 465 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 SDHAP31040 664 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 PBX2P40425 430 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 MECP2P51608 486 aaKnown RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 PRMT2P55345 433 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 SPOCK1Q08629 439 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 DMWDQ09019 674 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 GPM6BQ13491 265 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 ZNF141Q15928 474 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 SLC6A19Q695T7 634 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 KRT77Q7Z794 578 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 CDC20BQ86Y33 519 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 CMBLQ96DG6 245 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 PCDHB16Q9NRJ7 776 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 OR4E1P0C645 316 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 MNDAP41218 407 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 MC2RQ01718 297 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 MFGE8Q08431 387 aaPredicted RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 LY6G6FQ5SQ64 297 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 TMEM88Q6PEY1 159 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 RHOUQ7L0Q8 258 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 RTN4RL2Q86UN3 420 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 PRSS58Q8IYP2 241 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 EXD3Q8N9H8 876 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 RPS4Y2Q8TD47 263 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 MMABQ96EY8 250 aaPredicted RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 NPAS1Q99742 590 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 LMF2Q9BU23 707 aaKnown RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 PDCD10Q9BUL8 212 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 PRTFDC1Q9NRG1 225 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 GDE1Q9NZC3 331 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 DENND4AQ7Z401 1863 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 PRAMEF2O60811 474 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 RAB3DO95716 219 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 CSRP1P21291 193 aaKnown RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 CALCRP30988 508 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 NTSR1P30989 418 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 ZNF169Q14929 603 aaPredicted RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 DMRTC1Q5HYR2 192 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 UNQ6126/PRO20091Q6UXV3 157 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 TAF8Q7Z7C8 310 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 GABRG1Q8N1C3 465 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 BPIFCQ8NFQ6 507 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 STEAP2Q8NFT2 490 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 OR13H1Q8NG92 308 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 OR6K3Q8NGY3 331 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 HERVK_113Q902F9 699 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 FAM46BQ96A09 425 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 GAL3ST4Q96RP7 486 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 CMKLR1Q99788 373 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 ZNF471Q9BX82 626 aaPredicted RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 PNO1Q9NRX1 252 aaKnown RBP12.85□□□□□ -0.35
ERCC3-203ENST00000445889 GLS2Q9UI32 602 aa12.85□□□□□ -0.35
ERCC3-203ENST00000445889 TMEM235A6NFC5 223 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 SDR16C5Q8N3Y7 309 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 C12orf45Q8N5I9 185 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-203ENST00000445889 JAGN1Q8N5M9 183 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-203ENST00000445889 LRRC75AQ8NAA5 344 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 CLEC1AQ8NC01 280 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 ACBD4Q8NC06 268 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 TMEM185AQ8NFB2 350 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 OR1J4Q8NGS1 313 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-203ENST00000445889 INTS14Q96SY0 518 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 OR8D2Q9GZM6 311 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 TAS2R4Q9NYW5 299 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 PLCL2Q9UPR0 1127 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 MRPS18BQ9Y676 258 aaKnown RBP12.84□□□□□ -0.35
ERCC3-203ENST00000445889 SLCO1B1Q9Y6L6 691 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 A0A0J9YY10 115 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 TMEM82A0PJX8 343 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 EFCAB7A8K855 629 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 LINC01565O15544 149 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 GPR3P46089 330 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 AKR1D1P51857 326 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms