RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CPEB3Q8NE35 698 aaKnown RBP9.34□□□□□ -0.91
SF3A1-203ENST00000444440 IL17RDQ8NFM7 739 aa9.34□□□□□ -0.91
SF3A1-203ENST00000444440 OR51A7Q8NH64 312 aa9.34□□□□□ -0.91
SF3A1-203ENST00000444440 ZNF519Q8TB69 540 aa9.34□□□□□ -0.91
SF3A1-203ENST00000444440 NSMAFQ92636 917 aa9.34□□□□□ -0.91
SF3A1-203ENST00000444440 OR51B6Q9H340 312 aa9.34□□□□□ -0.91
SF3A1-203ENST00000444440 TXNIPQ9H3M7 391 aa9.34□□□□□ -0.91
SF3A1-203ENST00000444440 GORASP2Q9H8Y8 452 aa9.34□□□□□ -0.91
SF3A1-203ENST00000444440 ZNF346Q9UL40 294 aaKnown RBP9.34□□□□□ -0.91
SF3A1-203ENST00000444440 CMAHPQ9Y471 501 aa9.34□□□□□ -0.91
SF3A1-203ENST00000444440 LOC390937A0A1W2PQ73 354 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 LRP5LA4QPB2 252 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 NPIPB13A6NJU9 1138 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 A8MV72 311 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-203ENST00000444440 NPIPB4C9JG80 1138 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 H7C1C5 153 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 IMPA2O14732 288 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 NCR1O76036 304 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 DIRAS1O95057 198 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 DAOP14920 347 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 ITGA2P17301 1181 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 TCN1P20061 433 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-203ENST00000444440 FXYD6P3P58550 94 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 CTXN1P60606 82 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 RPL27P61353 136 aaKnown RBP9.33□□□□□ -0.92
SF3A1-203ENST00000444440 LCN6P62502 163 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 TRIP10Q15642 601 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 ALKBH6Q3KRA9 238 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 IQCCQ4KMZ1 466 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 ELFN2Q5R3F8 820 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 SLC16A14Q7RTX9 510 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 HDDC2Q7Z4H3 204 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 DEFB107AQ8IZN7 70 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 RNF113BQ8IZP6 322 aaKnown RBP9.33□□□□□ -0.92
SF3A1-203ENST00000444440 ARHGAP24Q8N264 748 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 FITM2Q8N6M3 262 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 SLC30A7Q8NEW0 376 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 SLC7A13Q8TCU3 470 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 ACOT11Q8WXI4 607 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-203ENST00000444440 GTF3AQ92664 365 aaKnown RBP9.33□□□□□ -0.92
SF3A1-203ENST00000444440 C7orf34Q96L11 122 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 PIMREGQ9BSJ6 248 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 DENND2DQ9H6A0 471 aaPredicted RBP9.33□□□□□ -0.92
SF3A1-203ENST00000444440 DYNLRB1Q9NP97 96 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 DCAF13Q9NV06 445 aaKnown RBP9.33□□□□□ -0.92
SF3A1-203ENST00000444440 CD300AQ9UGN4 299 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 MAGEL2Q9UJ55 1249 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 ADAM18Q9Y3Q7 739 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 ENPP4Q9Y6X5 453 aa9.33□□□□□ -0.92
SF3A1-203ENST00000444440 LOC100509620A0A075B734 347 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 EFCAB9A8MZ26 197 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 CENPBD1B2RD01 187 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 NDUFS8O00217 210 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 LILRA1O75019 489 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 HPXP02790 462 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 SAGP10523 405 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-203ENST00000444440 NAT2P11245 290 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 ZNF32P17041 273 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 RHCEP18577 417 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 CALB2P22676 271 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 IGFBP5P24593 272 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 GIFP27352 417 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 MSX2P35548 267 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-203ENST00000444440 WNT5AP41221 380 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 SMIM11AP58511 58 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 ERVK-25P63136 954 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 MRPS34P82930 218 aaKnown RBP9.32□□□□□ -0.92
SF3A1-203ENST00000444440 CD47Q08722 323 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 DBPQ10586 325 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-203ENST00000444440 HNRNPA0Q13151 305 aaKnown RBP9.32□□□□□ -0.92
SF3A1-203ENST00000444440 RIN1Q13671 783 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 SEC23BQ15437 767 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 ANKDD1AQ495B1 522 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 MESTQ5EB52 335 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 PABPC1L2AQ5JQF8 200 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 OTPQ5XKR4 325 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 PODNL1Q6PEZ8 512 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 FOXL2NBQ6ZUU3 175 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 IL17RELQ6ZVW7 336 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 MBOAT2Q6ZWT7 520 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 AKR7LQ8NHP1 331 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 BCAS4Q8TDM0 211 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 YIPF5Q969M3 257 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 MCUR1Q96AQ8 359 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 MSI2Q96DH6 328 aaKnown RBP9.32□□□□□ -0.92
SF3A1-203ENST00000444440 PYURFQ96I23 114 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 NSMCE2Q96MF7 247 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 FUZQ9BT04 418 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 RAB1BQ9H0U4 201 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 ANKRD19PQ9H560 264 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 RNF121Q9H920 327 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 NMNAT1Q9HAN9 279 aaPredicted RBP9.32□□□□□ -0.92
SF3A1-203ENST00000444440 NDUFAF4Q9P032 175 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 STX18Q9P2W9 335 aaKnown RBP9.32□□□□□ -0.92
SF3A1-203ENST00000444440 REV1Q9UBZ9 1251 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 SLC7A8Q9UHI5 535 aa9.32□□□□□ -0.92
SF3A1-203ENST00000444440 TRBV4-1A0A0J9YWV2 114 aa9.31□□□□□ -0.92
SF3A1-203ENST00000444440 M0R233 179 aa9.31□□□□□ -0.92
SF3A1-203ENST00000444440 WNT9BO14905 357 aa9.31□□□□□ -0.92
SF3A1-203ENST00000444440 SYNGR3O43761 229 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms