RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 THOC1Q96FV9 657 aaKnown RBP11.65□□□□□ -0.54
LINC00642-202ENST00000442515 FAM71F1Q96KD3 344 aaPredicted RBP11.65□□□□□ -0.54
LINC00642-202ENST00000442515 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.65□□□□□ -0.54
LINC00642-202ENST00000442515 ZNF232Q9UNY5 417 aa11.65□□□□□ -0.54
LINC00642-202ENST00000442515 TENM3Q9P273 2699 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 C11orf98E9PRG8 122 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 PLPP3O14495 311 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 DHHO43323 396 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 PIP5K1CO60331 668 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 GPR137BO60478 399 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 OPN1MWP04001 364 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 MMP7P09237 267 aaPredicted RBP11.64□□□□□ -0.55
LINC00642-202ENST00000442515 WNT2P09544 360 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 OPN1MW2P0DN77 364 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 OPN1MW3P0DN78 364 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 THRBP10828 461 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 ETFAP13804 333 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 RPS2P15880 293 aaKnown RBP11.64□□□□□ -0.55
LINC00642-202ENST00000442515 SERPINB5P36952 375 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 HSF2Q03933 536 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 RFPL4BQ6ZWI9 263 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 C1orf174Q8IYL3 243 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 LSMEM1Q8N8F7 131 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 DNAJA4Q8WW22 397 aaPredicted RBP11.64□□□□□ -0.55
LINC00642-202ENST00000442515 TMEM19Q96HH6 336 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 TEX37Q96LM6 180 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 EPYCQ99645 322 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 SLC19A3Q9BZV2 496 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 IFT52Q9Y366 437 aa11.64□□□□□ -0.55
LINC00642-202ENST00000442515 KRT75O95678 551 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 SHBGP04278 402 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 STOMP27105 288 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 CRATP43155 626 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 BPIFB3P59826 476 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 DSTNP60981 165 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 FGF12P61328 243 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 GNB2P62879 340 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 MELKQ14680 651 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 NRN1LQ496H8 165 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 PDCD4Q53EL6 469 aaKnown RBP11.63□□□□□ -0.55
LINC00642-202ENST00000442515 MTX3Q5HYI7 312 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 PABPC1L2AQ5JQF8 200 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 MUC20Q8N307 709 aaPredicted RBP11.63□□□□□ -0.55
LINC00642-202ENST00000442515 ABHD4Q8TB40 342 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 ZNF566Q969W8 418 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 APOPT1Q96IL0 206 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 SAMD8Q96LT4 415 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 ZIM3Q96PE6 472 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 RHOXF2Q9BQY4 288 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 TXLNGYQ9BZA5 131 aa11.63□□□□□ -0.55
LINC00642-202ENST00000442515 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00642-202ENST00000442515 V9GYY5 206 aaPredicted RBP11.63□□□□□ -0.55
LINC00642-202ENST00000442515 TANC2Q9HCD6 1990 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 A0A0G2JPF8 293 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 KIR2DS1A0A191URI9 304 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 C5orf49A4QMS7 147 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 HNRNPCL2B2RXH8 293 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 HNRNPCL3B7ZW38 293 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 HNRNPCL1O60812 293 aaKnown RBP11.62□□□□□ -0.55
LINC00642-202ENST00000442515 QDPRP09417 244 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 FAM153BP0C7A2 387 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 PGA4P0DJD7 388 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 PGA3P0DJD8 388 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 HNRNPCL4P0DMR1 293 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 ADORA3P0DMS8 318 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 TNFRSF1AP19438 455 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 NME5P56597 212 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 CDK5R2Q13319 367 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 Q6ZSV7 163 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 SLC35D2Q76EJ3 337 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 COMTD1Q86VU5 262 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 KLBQ86Z14 1044 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 LRRC18Q8N456 261 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 FITM2Q8N6M3 262 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 C10orf53Q8N6V4 93 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 ZSCAN4Q8NAM6 433 aaPredicted RBP11.62□□□□□ -0.55
LINC00642-202ENST00000442515 HIPK4Q8NE63 616 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 SLC25A44Q96H78 314 aaPredicted RBP11.62□□□□□ -0.55
LINC00642-202ENST00000442515 POM121L2Q96KW2 1035 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 NUDT16L1Q9BRJ7 211 aaKnown RBP11.62□□□□□ -0.55
LINC00642-202ENST00000442515 RASSF4Q9H2L5 321 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 A4GALTQ9NPC4 353 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 ARGLU1Q9NWB6 273 aaPredicted RBP11.62□□□□□ -0.55
LINC00642-202ENST00000442515 MKS1Q9NXB0 559 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 SLC17A7Q9P2U7 560 aa11.62□□□□□ -0.55
LINC00642-202ENST00000442515 EIF3KQ9UBQ5 218 aaKnown RBP11.62□□□□□ -0.55
LINC00642-202ENST00000442515 DYNC2H1Q8NCM8 4307 aaKnown RBP11.62□□□□□ -0.55
LINC00642-202ENST00000442515 LOC100509620A0A075B734 347 aa11.61□□□□□ -0.55
LINC00642-202ENST00000442515 TMEM178BH3BS89 294 aa11.61□□□□□ -0.55
LINC00642-202ENST00000442515 H3BSA7 217 aa11.61□□□□□ -0.55
LINC00642-202ENST00000442515 TNFRSF13BO14836 293 aaPredicted RBP11.61□□□□□ -0.55
LINC00642-202ENST00000442515 TIMM8AO60220 97 aaPredicted RBP11.61□□□□□ -0.55
LINC00642-202ENST00000442515 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
LINC00642-202ENST00000442515 TNFSF4P23510 183 aa11.61□□□□□ -0.55
LINC00642-202ENST00000442515 MMP16P51512 607 aa11.61□□□□□ -0.55
LINC00642-202ENST00000442515 PPP1CBP62140 327 aa11.61□□□□□ -0.55
LINC00642-202ENST00000442515 FAM91A1Q658Y4 838 aa11.61□□□□□ -0.55
LINC00642-202ENST00000442515 C11orf87Q6NUJ2 197 aa11.61□□□□□ -0.55
LINC00642-202ENST00000442515 WDR93Q6P2C0 686 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms