RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ASAH1Q13510 395 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 BAK1Q16611 211 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 AARDQ4LEZ3 155 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 AADACL4Q5VUY2 407 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 C3orf33Q6P1S2 294 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 CXXC5Q7LFL8 322 aaKnown RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 ZNF227Q86WZ6 799 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 CPOQ8IVL8 374 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 ATP6V1C2Q8NEY4 427 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 DMBX1Q8NFW5 382 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 MOSPD2Q8NHP6 518 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 POC1BQ8TC44 478 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 OTULINQ96BN8 352 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 DNAJA3Q96EY1 480 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 SIGLEC11Q96RL6 698 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 GPX7Q96SL4 187 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 NRIP3Q9NQ35 241 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 HINT3Q9NQE9 182 aaKnown RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 BIN3Q9NQY0 253 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 IER3IP1Q9Y5U9 82 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 PSMD9O00233 223 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 CD14P08571 375 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 ACAA1P09110 424 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 RAC2P15153 192 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 FKBP2P26885 142 aaKnown RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 C21orf33P30042 268 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 CDH11P55287 796 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 SOX8P57073 446 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 MVKQ03426 396 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 RPL18Q07020 188 aaKnown RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 FOXC1Q12948 553 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 CLN3Q13286 438 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 IRF3Q14653 427 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 SGCBQ16585 318 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 BTN2A1Q7KYR7 527 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 KRT74Q7RTS7 529 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 GTPBP8Q8N3Z3 284 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 KBTBD8Q8NFY9 601 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 OR5J2Q8NH18 312 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 SLC25A43Q8WUT9 341 aaPredicted RBP7.27□□□□□ -1.25
CCDC39-201ENST00000442201 KATNB1Q9BVA0 655 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 ASPNQ9BXN1 380 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 POTEKPQ9BYX7 375 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 DCSTAMPQ9H295 470 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 DKKL1Q9UK85 242 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 SLC6A5Q9Y345 797 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 ADAM18Q9Y3Q7 739 aa7.27□□□□□ -1.25
CCDC39-201ENST00000442201 FAM183AA6NL82 134 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 PRR23D1E9PI22 279 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 H3BML4 177 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 AKAP8O43823 692 aaKnown RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 NEURL1O76050 574 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 OR6A2O95222 327 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 FADS2O95864 444 aaKnown RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 ACSM4P0C7M7 580 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 PRR23D2P0DMB1 279 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 APEHP13798 732 aaKnown RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 CNR1P21554 472 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 PAICSP22234 425 aaKnown RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 GRPRP30550 384 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 PCP4P48539 62 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 CTXN1P60606 82 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 TOMM20Q15388 145 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 C21orf62-AS1Q17RA5 79 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 SPINK14Q6IE38 97 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 GID4Q8IVV7 300 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 MFSD8Q8NHS3 518 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 RORBQ92753 470 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 RELTQ969Z4 430 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 TAPBPLQ9BX59 468 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 PURGQ9UJV8 347 aaKnown RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 DMRT1Q9Y5R6 373 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 EXPH5Q8NEV8 1989 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 IRGMA1A4Y4 181 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 ZNF891A8MT65 544 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 EFNA2O43921 213 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 TSPAN19P0C672 248 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 WT1P19544 449 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 MYL9P24844 172 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 MTNR1AP48039 350 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 ERVK-25P63136 954 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 CRMP1Q14194 572 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 POU4F3Q15319 338 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 OR1C1Q15619 314 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 CRTC2Q53ET0 693 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 KLHL22Q53GT1 634 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 RAET1LQ5VY80 246 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 FAM98AQ8NCA5 519 aaKnown RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 OR52E2Q8NGJ4 325 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 OR5M1Q8NGP8 315 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 NSMAFQ92636 917 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 KLHL1Q9NR64 748 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 PTTG3PQ9NZH4 202 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 KLK13Q9UKR3 277 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 BOKQ9UMX3 212 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-201ENST00000442201 A0A0G2JMM0 328 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 A0A1W2PPB8 328 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 A0A1W2PRS3 328 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 KIR3DP1A8MWS1 328 aa7.26□□□□□ -1.25
CCDC39-201ENST00000442201 FTCDNL1E5RQL4 147 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms