RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TRIM2Q9C040 744 aa9.04□□□□□ -0.96
CDC42SE1-202ENST00000439374 C2orf42Q9NWW7 574 aa9.04□□□□□ -0.96
CDC42SE1-202ENST00000439374 C19orf53Q9UNZ5 99 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-202ENST00000439374 SLC22A13Q9Y226 551 aa9.04□□□□□ -0.96
CDC42SE1-202ENST00000439374 SPTBN2O15020 2390 aa9.04□□□□□ -0.96
CDC42SE1-202ENST00000439374 IGHV3-20A0A0C4DH32 117 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 PIN1P1O15428 100 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 ALOX12BO75342 701 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 SCGB1D2O95969 90 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 GNALP38405 381 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 MMP15P51511 669 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 NRG3P56975 720 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 SLC9A3R2Q15599 337 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 ARHGAP11BQ3KRB8 267 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 RNLSQ5VYX0 342 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 C16orf47Q6ZP98 133 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 ESRP2Q9H6T0 727 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZNF304Q9HCX3 659 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 FLRT3Q9NZU0 649 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 COL6A3P12111 3177 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 ESPL1Q14674 2120 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 TRANK1O15050 2925 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 CCDC163A0A0D9SF12 145 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 HTR3BO95264 441 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 RAB3DO95716 219 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 IFNGR1P15260 489 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 CBX5P45973 191 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 NPBWR1P48145 328 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 UBE2NLQ5JXB2 153 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 OR2W3Q7Z3T1 314 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 CDH26Q8IXH8 852 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 MAFIPQ8WZ33 124 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 DCUN1D4Q92564 292 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 PMM1Q92871 262 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 C14orf79Q96F83 325 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 PGLYRP3Q96LB9 341 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 WDR77Q9BQA1 342 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 PITHD1Q9GZP4 211 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 LDAHQ9H6V9 325 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 NRIP3Q9NQ35 241 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 NCDNQ9UBB6 729 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 SLC35A3Q9Y2D2 325 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZNF337Q9Y3M9 751 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 DIDO1Q9BTC0 2240 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 A0A0J9YY10 115 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 C17orf105B2RV13 164 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 GPR89AB7ZAQ6 455 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 E9PQ18 207 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 LDOC1O95751 146 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 GPR89BP0CG08 455 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 CD34P28906 385 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 LIPNQ5VXI9 398 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 CBLN3Q6UW01 205 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 OR2L13Q8N349 312 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 INO80EQ8NBZ0 244 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZNF485Q8NCK3 441 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 SLC22A8Q8TCC7 542 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZC3H10Q96K80 434 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 SELENOIQ9C0D9 397 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 RPS10P5Q9NQ39 176 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 CENPMQ9NSP4 180 aa9.03□□□□□ -0.96
CDC42SE1-202ENST00000439374 PRSS44E7EML9 344 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 GALR3O60755 368 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 CRYBA1P05813 215 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 SFTPBP07988 381 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 RNH1P13489 461 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 GABRG2P18507 467 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 POU3F4P49335 361 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 PRKXP51817 358 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZP2Q05996 745 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 DYRK1AQ13627 763 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 MLC1Q15049 377 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 CDK5R1Q15078 307 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 ADAM5Q6NVV9 412 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 TMPPEQ6ZT21 453 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 MDGA2Q7Z553 956 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 MARCH3Q86UD3 253 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 CA13Q8N1Q1 262 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF321PQ8N8H1 164 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 PPP1R1CQ8WVI7 109 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 PRSS27Q9BQR3 290 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 IFT22Q9H7X7 185 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 MTCL1Q9Y4B5 1905 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 RHPN2P1A8MT19 583 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 SEC14L5O43304 696 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 ITGA10O75578 1167 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF205O95201 554 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 SPARCP09486 303 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF14P17017 642 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 CXADRP78310 365 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 AIMP2Q13155 320 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 DUSP8Q13202 625 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 MEP1BQ16820 701 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 LDLRAD3Q86YD5 345 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 GVQW1Q8N7I0 195 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 TSTD1Q8NFU3 115 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR5AK2Q8NH90 309 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 BAHD1Q8TBE0 780 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 ELP5Q8TE02 316 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 TSLPQ969D9 159 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms