RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 ZBP1Q9H171 429 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 NRIP3Q9NQ35 241 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 CLCF1Q9UBD9 225 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 F6UZH7 168 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 GPLD1P80108 840 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 MLLT11Q13015 90 aaPredicted RBP12.66□□□□□ -0.38
LRCH3-206ENST00000438796 SPCS2Q15005 226 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 BCL7AQ4VC05 210 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 ACTBL2Q562R1 376 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 CLVS2Q5SYC1 327 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 FAM122CQ6P4D5 195 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 FAM221AA4D161 298 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 MBLAC1A4D2B0 266 aaPredicted RBP12.66□□□□□ -0.38
LRCH3-206ENST00000438796 OR5G3P0C626 314 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 SOX18P35713 384 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 CSN1S1P47710 185 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 FAM74A1Q5RGS3 127 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 FRMPD2BQ6IN97 320 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 GJC3Q8NFK1 279 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 ARPC5LQ9BPX5 153 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 MENTQ9BUN1 341 aa12.66□□□□□ -0.38
LRCH3-206ENST00000438796 GPR37O15354 613 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 THBS1P07996 1170 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 EIF1P41567 113 aaKnown RBP12.65□□□□□ -0.38
LRCH3-206ENST00000438796 GIPRP48546 466 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 DAPP51397 102 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 REEP5Q00765 189 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 RBMS2Q15434 407 aaKnown RBP12.65□□□□□ -0.38
LRCH3-206ENST00000438796 NKAIN1Q4KMZ8 207 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 CNTN4Q8IWV2 1026 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 OR10G3Q8NGC4 313 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 ROBO4Q8WZ75 1007 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 CXCL16Q9H2A7 254 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 SNAPINO95295 136 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 QDPRP09417 244 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 RAB5CP51148 216 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 CCR6P51684 374 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 TEKQ02763 1124 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 SPATA46Q5T0L3 261 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 C1orf140Q5VVS0 124 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 C15orf54Q8N8G6 183 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 SLC30A7Q8NEW0 376 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 OR8U1Q8NH10 309 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 SPPL3Q8TCT6 385 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 UBE2ZQ9H832 354 aaPredicted RBP12.65□□□□□ -0.38
LRCH3-206ENST00000438796 CLEC5AQ9NY25 188 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 SLC23A1Q9UHI7 598 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 TMEM202A6NGA9 273 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 CCSO14618 274 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 CSNK1DP48730 415 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 FOXK2Q01167 660 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 ZNF91Q05481 1191 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 ADAMTSL4Q6UY14 1074 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 RPS19BP1Q86WX3 136 aaKnown RBP12.65□□□□□ -0.38
LRCH3-206ENST00000438796 EGFL6Q8IUX8 553 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 CPPED1Q9BRF8 314 aaPredicted RBP12.65□□□□□ -0.38
LRCH3-206ENST00000438796 OR11A1Q9GZK7 315 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 ACSS1Q9NUB1 689 aaPredicted RBP12.65□□□□□ -0.38
LRCH3-206ENST00000438796 ZNF454Q8N9F8 522 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 OR52I1Q8NGK6 324 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 ANKRD60Q9BZ19 345 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 TBC1D29Q9UFV1 150 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 GDNFP39905 211 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 CST9Q5W186 159 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 Q6ZRG5 221 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 SKA3Q8IX90 412 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 GMPR2Q9P2T1 348 aaKnown RBP12.65□□□□□ -0.38
LRCH3-206ENST00000438796 LOXL2Q9Y4K0 774 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 TACR1P25103 407 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 FAM109AQ8N4B1 249 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 ZNF486Q96H40 463 aaPredicted RBP12.65□□□□□ -0.38
LRCH3-206ENST00000438796 FIZ1Q96SL8 496 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 IER2Q9BTL4 223 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 TMEM9BQ9NQ34 198 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 PDLIM7Q9NR12 457 aa12.65□□□□□ -0.38
LRCH3-206ENST00000438796 FAM212BQ9NTI7 297 aaPredicted RBP12.65□□□□□ -0.38
LRCH3-206ENST00000438796 PENKP01210 267 aaPredicted RBP12.64□□□□□ -0.39
LRCH3-206ENST00000438796 OR2T7P0C7T2 308 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 GPR12P47775 334 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 UBE2G1P62253 170 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 BTN1A1Q13410 526 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 RNF113BQ8IZP6 322 aaKnown RBP12.64□□□□□ -0.39
LRCH3-206ENST00000438796 ATF6BQ99941 703 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 CHST6Q9GZX3 395 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 TAS2R5Q9NYW4 299 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 MOKQ9UQ07 419 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 GLB1P16278 677 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 TAGLN2P37802 199 aaKnown RBP12.64□□□□□ -0.39
LRCH3-206ENST00000438796 EXD3Q8N9H8 876 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 SLC2A8Q9NY64 477 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 TMEM189-UBE2V1I3L0A0 370 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 CSO75390 466 aaKnown RBP12.64□□□□□ -0.39
LRCH3-206ENST00000438796 EIF2DP41214 584 aaKnown RBP12.64□□□□□ -0.39
LRCH3-206ENST00000438796 PSMB3P49720 205 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 SUB1P53999 127 aaKnown RBP eCLIP12.64□□□□□ -0.39
LRCH3-206ENST00000438796 MRPS10P82664 201 aaKnown RBP12.64□□□□□ -0.39
LRCH3-206ENST00000438796 KCNG3Q8TAE7 436 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 SLC35E1Q96K37 410 aa12.64□□□□□ -0.39
LRCH3-206ENST00000438796 FAM103A1Q9BTL3 118 aaKnown RBP12.64□□□□□ -0.39
LRCH3-206ENST00000438796 MARCH5Q9NX47 278 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms