RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 SEMA4CQ9C0C4 833 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 UBE2ZQ9H832 354 aaPredicted RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 MRPL22Q9NWU5 206 aaKnown RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 IGLV3-12A0A075B6K2 115 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 A0A087WV48 116 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 UBE2QL1A1L167 161 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 GGT3PA6NGU5 568 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 FTCDNL1E5RQL4 147 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 NPIPA5E9PKD4 350 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 SOX1O00570 391 aaPredicted RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 BCAT2O15382 392 aaPredicted RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 ZNF208O43345 1280 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 CTAG2O75638 210 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 SLC22A5O76082 557 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 AQP8O94778 261 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 GPANK1O95872 356 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 HEXBP07686 556 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 GIPP09681 153 aaPredicted RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 AKAIN1P0CW23 69 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ACHEP22303 614 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 MSX1P28360 303 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 CCKBRP32239 447 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 PTGS2P35354 604 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 RAP2BP61225 183 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 PUDPQ08623 228 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 RBMS2Q15434 407 aaKnown RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 LINC00303Q3SY05 128 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 TEX261Q6UWH6 196 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ZNF704Q6ZNC4 412 aaPredicted RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 COX15Q7KZN9 410 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ANKRD37Q7Z713 158 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 OR51D1Q8NGF3 324 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ANGPTL6Q8NI99 470 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 NUBPLQ8TB37 319 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 GCDHQ92947 438 aaPredicted RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 FAM3DQ96BQ1 224 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 DDIT4LQ96D03 193 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 SLX1AQ9BQ83 275 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ABHD6Q9BV23 337 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 POTEKPQ9BYX7 375 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ULBP3Q9BZM4 244 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 MGAT4CQ9UBM8 478 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 EIF3KQ9UBQ5 218 aaKnown RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 NPIPA1Q9UND3 350 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 FLVCR2Q9UPI3 526 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 R4GMQ9 66 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 U3KQ87 197 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 A0A0A6YYH2 397 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 LINC00862A6NCI5 91 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 A6NJ64 397 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 CD37P11049 281 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 PNLIPP16233 465 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 CTLA4P16410 223 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 DCTDP32321 178 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 PRSS3P35030 304 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 RPS27P42677 84 aaKnown RBP9.37□□□□□ -0.91
CD44-210ENST00000434472 RAD52P43351 418 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 OR3A3P47888 321 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 POU3F4P49335 361 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 ACTBP60709 375 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 ZP1P60852 638 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 GPR85P60893 370 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 PSMA6P60900 246 aaKnown RBP9.37□□□□□ -0.91
CD44-210ENST00000434472 ACTG1P63261 375 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 DHODHQ02127 395 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 PCGF3Q3KNV8 242 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 C2orf76Q3KRA6 126 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 ESCO2Q56NI9 601 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 TMEM255AQ5JRV8 349 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 STPG1Q5TH74 334 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 TMEM244Q5VVB8 128 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 ZNF626Q68DY1 528 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 TMEM225Q6GV28 225 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 FAM166AQ6J272 317 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 TMEM71Q6P5X7 295 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 FAM198BQ6UWH4 519 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 LANCL3Q6ZV70 420 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 H1FNTQ75WM6 255 aaPredicted RBP9.37□□□□□ -0.91
CD44-210ENST00000434472 SLC35D2Q76EJ3 337 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 NDUFAF7Q7L592 441 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 ZNF680Q8NEM1 530 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 OR11H4Q8NGC9 324 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 OR51A4Q8NGJ6 313 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 OR5L2Q8NGL0 311 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 OR6M1Q8NGM8 313 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 OR2T35Q8NGX2 323 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 OR8K3Q8NH51 312 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 STT3BQ8TCJ2 826 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 ASB10Q8WXI3 467 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 FOXRED1Q96CU9 486 aaPredicted RBP9.37□□□□□ -0.91
CD44-210ENST00000434472 METTL17Q9H7H0 456 aaPredicted RBP9.37□□□□□ -0.91
CD44-210ENST00000434472 SCPEP1Q9HB40 452 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 BEX1Q9HBH7 125 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 SDHAF3Q9NRP4 125 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 PISDQ9UG56 409 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 ING1Q9UK53 422 aaPredicted RBP9.37□□□□□ -0.91
CD44-210ENST00000434472 HHLA2Q9UM44 414 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 GTF2A1LQ9UNN4 478 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 PPIEQ9UNP9 301 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms