RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 MRPL22Q9NWU5 206 aaKnown RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 MMACHCQ9Y4U1 282 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 OR2M5A3KFT3 312 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 L7N2F9 121 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 RGS11O94810 467 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 OR2A4O95047 310 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 WNT11O96014 354 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 GP1BBP13224 206 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 GTF2F2P13984 249 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 NFYAP23511 347 aaPredicted RBP10.64□□□□□ -0.71
CD44-209ENST00000433892 MECP2P51608 486 aaKnown RBP10.64□□□□□ -0.71
CD44-209ENST00000433892 RAP2BP61225 183 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 RPL27P61353 136 aaKnown RBP10.64□□□□□ -0.71
CD44-209ENST00000433892 INSM1Q01101 510 aaPredicted RBP10.64□□□□□ -0.71
CD44-209ENST00000433892 PLCXD2Q0VAA5 305 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 RBMS2Q15434 407 aaKnown RBP10.64□□□□□ -0.71
CD44-209ENST00000433892 NSDHLQ15738 373 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 RAB30Q15771 203 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 C2orf68Q2NKX9 166 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 HLA-DQA1Q5Y7H0 255 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 OR7E24Q6IFN5 339 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 CHMP1BQ7LBR1 199 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 ZNF679Q8IYX0 411 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 OR5M1Q8NGP8 315 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 DVL3Q92997 716 aaPredicted RBP10.64□□□□□ -0.71
CD44-209ENST00000433892 MARVELD3Q96A59 401 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 OR2A7Q96R45 310 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 GAL3ST1Q99999 423 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 WDFY3Q8IZQ1 3526 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 SDK1Q7Z5N4 2213 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 ASXL3Q9C0F0 2248 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 A0A1W2PPL8 197 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 SUSD5O60279 629 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 DOK2O60496 412 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 CDC40O60508 579 aaKnown RBP eCLIP10.64□□□□□ -0.71
CD44-209ENST00000433892 CSF1P09603 554 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 CTLA4P16410 223 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 PGCP20142 388 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 H2BFSP57053 126 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 SCAND1P57086 179 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 ADAM8P78325 824 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 MFGE8Q08431 387 aaPredicted RBP10.64□□□□□ -0.71
CD44-209ENST00000433892 MELKQ14680 651 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 ELAVL1Q15717 326 aaKnown RBP10.64□□□□□ -0.71
CD44-209ENST00000433892 RAB11BQ15907 218 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 SGCBQ16585 318 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 SLC18B1Q6NT16 456 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 NDUFAF7Q7L592 441 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 SLC36A1Q7Z2H8 476 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 OR51S1Q8NGJ8 323 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 ZNF519Q8TB69 540 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 LRRC20Q8TCA0 184 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 RNF128Q8TEB7 428 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 ZDHHC12Q96GR4 267 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 MSANTD3Q96H12 275 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 OR11A1Q9GZK7 315 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 UCK1Q9HA47 277 aa10.64□□□□□ -0.71
CD44-209ENST00000433892 TMED7-TICAM2A0A0A6YYA0 188 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 ALG1L2C9J202 215 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 H3BMH7 237 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 TSPAN2O60636 221 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 TPPPO94811 219 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 MPZL1O95297 269 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 CD3DP04234 171 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 RRASP10301 218 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 ABCD3P28288 659 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 CD38P28907 300 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 DHODHQ02127 395 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 AANATQ16613 207 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 TEX30Q5JUR7 227 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 FDX2Q6P4F2 183 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 KRT77Q7Z794 578 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 KDM8Q8N371 416 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 OR1J4Q8NGS1 313 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 OMA1Q96E52 524 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 DHRS9Q9BPW9 319 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 WWTR1Q9GZV5 400 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 ATG5Q9H1Y0 275 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 TAS2R8Q9NYW2 309 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 ZNF224Q9NZL3 707 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 DHDHQ9UQ10 334 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 TMED7Q9Y3B3 224 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 NUP210LQ5VU65 1888 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 IGLV1-36A0A0B4J1U3 117 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 IGHV1OR15-9A0A0B4J2B8 117 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 LOC100289279A0A1B0GTE1 492 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 TMEM272A0A1B0GTI8 110 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 TCRBV16S1A1N1A0A5B0 115 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 UBE2QL1A1L167 161 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 HSPB2A8KAH6 182 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 MCRIP1C9JLW8 97 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 SLC17A2O00624 439 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 EIF4E2O60573 245 aaKnown RBP10.63□□□□□ -0.71
CD44-209ENST00000433892 FREM3P0C091 2139 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 PRSS3P35030 304 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 DLX5P56178 289 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 FOXL2P58012 376 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 HSPB2Q16082 182 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 SFRP5Q5T4F7 317 aa10.63□□□□□ -0.71
CD44-209ENST00000433892 ARHGAP40Q5TG30 622 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms