RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 C16orf58Q96GQ5 468 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 DDA1Q9BW61 102 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 KCNIP1Q9NZI2 227 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 RBMX2Q9Y388 322 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PRSS37A4D1T9 235 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 L7N2F9 121 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CD160O95971 181 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SOD1P00441 154 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 MMP11P24347 488 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 LIPAP38571 399 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 COMPP49747 757 aaPredicted RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TAS2R20P59543 309 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 HERV-K104P61576 105 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TLE3Q04726 772 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ZP4Q12836 540 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 EIF2B1Q14232 305 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM128Q5BJH2 165 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 VAX1Q5SQQ9 334 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 C1orf100Q5SVJ3 147 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 DMRTA1Q5VZB9 504 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ALKBH2Q6NS38 261 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PAPD4Q6PIY7 484 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PET117Q6UWS5 81 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 HIST2H3AQ71DI3 136 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TAS1R1Q7RTX1 841 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TREM2Q9NZC2 230 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 VDAC3Q9Y277 283 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 HSPB11Q9Y547 144 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 A0A087WUU8 490 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 FAM90A26D6RGX4 464 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ATE1O95260 518 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SYNGR4O95473 234 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CSTBP04080 98 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 P04436 131 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 LAP3P28838 519 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 Q3ZCU0 254 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TRMT12Q53H54 448 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 C6orf183Q5T699 404 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SKA3Q8IX90 412 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 C3orf49Q96BT1 292 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 MKRN2Q9H000 416 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 POLQO75417 2590 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TECTAO75443 2155 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 A0A1W2PP55 124 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM82A0PJX8 343 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 DEGS1O15121 323 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 EDNRAP25101 427 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CXCL12P48061 93 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 F2RL1P55085 397 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 BAK1Q16611 211 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SMIM21Q3B7S5 101 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 C4orf46Q504U0 113 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 DNLZQ5SXM8 178 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 FAM3DQ96BQ1 224 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 RASD2Q96D21 266 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 VN1R3Q9BXE9 311 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 EQTNQ9NQ60 294 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 KCNK6Q9Y257 313 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 R4GMQ9 66 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ARL2-SNX15V9GYD0 113 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TCRBV21S2A2A0A5A6 115 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 NDUFB6O95139 128 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TFP02787 698 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SERPINA7P05543 415 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PGA3P0DJD8 388 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 MGMTP16455 207 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF28P17035 718 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CATR1Q13166 79 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 P2RY6Q15077 328 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF74Q16587 644 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 NKAIN1Q4KMZ8 207 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 Q7L0L9 218 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 DGLUCYQ7Z3D6 616 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 VN1R4Q7Z5H5 301 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 DCBLD1Q8N8Z6 715 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 EXD3Q8N9H8 876 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 DTX3Q8N9I9 347 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 OR1N1Q8NGS0 311 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 OR2Y1Q8NGV0 311 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 LKAAEAR1Q8TD35 194 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PIGTQ969N2 578 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 DMRTB1Q96MA1 342 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 MTFP1Q9UDX5 166 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 OPN4Q9UHM6 478 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 FREM1Q5H8C1 2179 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 FZD7O75084 574 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CA3P07451 260 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 KIR2DS2P43631 304 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PNRC1Q12796 327 aaPredicted RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CRMP1Q14194 572 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ESPNLQ6ZVH7 1005 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SGPP2Q8IWX5 399 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TDHQ8IZJ6 230 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SLC37A3Q8NCC5 494 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 OR5D16Q8NGK9 328 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 RNF141Q8WVD5 230 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PIGKQ92643 395 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF768Q9H5H4 540 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 FGF22Q9HCT0 170 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms