RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 VSIG4Q9Y279 399 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 CARHSP1Q9Y2V2 147 aaKnown RBP10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 ENTPD2Q9Y5L3 495 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 VCANP13611 3396 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 LY86O95711 162 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 SNRNP70P08621 437 aaKnown RBP10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC25A4P12235 298 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF44P15621 663 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 LAG3P18627 525 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 TLX1P31314 330 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 CD96P40200 585 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 MAP3K8P41279 467 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 PLAURQ03405 335 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 KLHL26Q53HC5 615 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 VWA2Q5GFL6 755 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 KIRREL2Q6UWL6 708 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 USP53Q70EK8 1073 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 MISPQ8IVT2 679 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 CHST4Q8NCG5 386 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 OR2G2Q8NGZ5 317 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF558Q96NG5 402 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 PHB2Q99623 299 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 NRIP2Q9BQI9 281 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 SYT4Q9H2B2 425 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 DCTN6O00399 190 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 PQBP1O60828 265 aaKnown RBP10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 NME2P22392 152 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 GPR143P51810 404 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 PJVKQ0ZLH3 352 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 GGTLC2Q14390 218 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ACER2Q5QJU3 275 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 GLYATL3Q5SZD4 288 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 OR52W1Q6IF63 320 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ADAM5Q6NVV9 412 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC35D2Q76EJ3 337 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 JAGN1Q8N5M9 183 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ACBD4Q8NC06 268 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 GPX8Q8TED1 209 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ROBO4Q8WZ75 1007 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 AKR1E2Q96JD6 320 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ARL5BQ96KC2 179 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 C1orf198Q9H425 327 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 WDR76Q9H967 626 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC22A13Q9Y226 551 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC27A6Q9Y2P4 619 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 PLXNA2O75051 1894 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 NUP210Q8TEM1 1887 aaPredicted RBP10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 HTR3BO95264 441 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 CD1AP06126 327 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ERCC1P07992 297 aaPredicted RBP10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 FOSL1P15407 271 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 S100PP25815 95 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ADH6P28332 368 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ID4P47928 161 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ECH1Q13011 328 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 RUNX2Q13950 521 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 EXOSC6Q5RKV6 272 aaKnown RBP10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF584Q8IVC4 421 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 GATSQ8NAP1 163 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 SMARCD2Q92925 531 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 OR51M1Q9H341 326 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 MMP26Q9NRE1 261 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 SMCO4Q9NRQ5 59 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 PRR13Q9NZ81 148 aa10.47□□□□□ -0.73
HMGCS1-202ENST00000433297 LOC100289279A0A1B0GTE1 492 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 A0A1B0GTI1 187 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 RNASEK-C17orf49H0YIS7 233 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 PSMB6P28072 239 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 SERPINF1P36955 418 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 CCR4P51679 360 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC22A6Q4U2R8 563 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 RNASE10Q5GAN6 216 aaKnown RBP10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 TCEAL5Q5H9L2 206 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 SKA3Q8IX90 412 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 GVQW1Q8N7I0 195 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 OR13C8Q8NGS7 320 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 EDARADDQ8WWZ3 215 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 OR8D1Q8WZ84 308 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 NXPE3Q969Y0 559 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 PFDN5Q99471 154 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 SGIP1Q9BQI5 828 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 A0A0A6YYC8 382 aaPredicted RBP10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 C5orf52A6NGY3 159 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 C1QTNF3-AMACRE9PGA6 284 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 I3L1I5 382 aaPredicted RBP10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 M0R036 132 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 FBXO24O75426 580 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 CMPK1P30085 196 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 CTXN1P60606 82 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 MOGAT2Q3SYC2 334 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 DPY19L2P2Q6ZN68 376 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 DNM1P46Q6ZS02 220 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 CDRT4Q8N9R6 151 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 ADAD2Q8NCV1 583 aaKnown RBP10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 ASB13Q8WXK3 278 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 GAS2L1Q99501 681 aaPredicted RBP10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 SULT4A1Q9BR01 284 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 RCC2Q9P258 522 aaKnown RBP10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 MRPS33Q9Y291 106 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms