RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 RUNDC3AQ59EK9 446 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 DLEU7Q6UYE1 221 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 SLC30A8Q8IWU4 369 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 C1orf174Q8IYL3 243 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 LRRC18Q8N456 261 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 CCL17Q92583 94 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 ZNF347Q96SE7 839 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 SEPHS2Q99611 448 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 EBF4Q9BQW3 602 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 MRPL13Q9BYD1 178 aaKnown RBP12.65□□□□□ -0.38
PRKDC-203ENST00000432581 PCDHAC1Q9H158 963 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 C7orf69Q9H7B7 122 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 SIAEQ9HAT2 523 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 CCNB1IP1Q9NPC3 277 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 CYSLTR2Q9NS75 346 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 STX18Q9P2W9 335 aaKnown RBP12.65□□□□□ -0.38
PRKDC-203ENST00000432581 EIF3KQ9UBQ5 218 aaKnown RBP12.65□□□□□ -0.38
PRKDC-203ENST00000432581 PLSCR5A0PG75 271 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 BLOC1S5-TXNDC5H3BN57 136 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 PRSS23O95084 383 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 CD247P20963 164 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 CCNOP22674 350 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 STOMP27105 288 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 ZNF133P52736 654 aaPredicted RBP12.64□□□□□ -0.39
PRKDC-203ENST00000432581 UBA52P62987 128 aaKnown RBP12.64□□□□□ -0.39
PRKDC-203ENST00000432581 PABPC1L2AQ5JQF8 200 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 C10orf128Q5T292 105 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 PATL1Q86TB9 770 aaKnown RBP12.64□□□□□ -0.39
PRKDC-203ENST00000432581 RBM45Q8IUH3 476 aaKnown RBP12.64□□□□□ -0.39
PRKDC-203ENST00000432581 ZDHHC22Q8N966 263 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 SYT14Q8NB59 555 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 VANGL1Q8TAA9 524 aaPredicted RBP12.64□□□□□ -0.39
PRKDC-203ENST00000432581 GTF3AQ92664 365 aaKnown RBP12.64□□□□□ -0.39
PRKDC-203ENST00000432581 EGLN1Q9GZT9 426 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 RABEP2Q9H5N1 569 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 SMURF2Q9HAU4 748 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 ESM1Q9NQ30 184 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 DDX28Q9NUL7 540 aaKnown RBP12.64□□□□□ -0.39
PRKDC-203ENST00000432581 CGGBP1Q9UFW8 167 aaPredicted RBP12.64□□□□□ -0.39
PRKDC-203ENST00000432581 OPN4Q9UHM6 478 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 LEF1Q9UJU2 399 aaPredicted RBP12.64□□□□□ -0.39
PRKDC-203ENST00000432581 CACNG2Q9Y698 323 aa12.64□□□□□ -0.39
PRKDC-203ENST00000432581 PPIAL4EA0A075B759 164 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 PPIAL4CA0A0B4J2A2 164 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 PPIAL4DF5H284 164 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 SPRY3O43610 288 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 TRMUO75648 421 aaKnown RBP12.63□□□□□ -0.39
PRKDC-203ENST00000432581 FSHBP01225 129 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 IGHV1-46P01743 117 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 PPIAL4FP0DN26 164 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 NR2C1P13056 603 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 ACADSP16219 412 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 MAKP20794 623 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 LIPAP38571 399 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 MMP15P51511 669 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 MRPS34P82930 218 aaKnown RBP12.63□□□□□ -0.39
PRKDC-203ENST00000432581 RPL18Q07020 188 aaKnown RBP12.63□□□□□ -0.39
PRKDC-203ENST00000432581 FOXL1Q12952 345 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 INTS11Q5TA45 600 aaKnown RBP12.63□□□□□ -0.39
PRKDC-203ENST00000432581 MBNL2Q5VZF2 373 aaKnown RBP12.63□□□□□ -0.39
PRKDC-203ENST00000432581 RBMS3Q6XE24 437 aaKnown RBP12.63□□□□□ -0.39
PRKDC-203ENST00000432581 DHDDSQ86SQ9 333 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 OR4D11Q8NGI4 311 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 LRRC8CQ8TDW0 803 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 ST7LQ8TDW4 575 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 RASSF5Q8WWW0 418 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 ASB10Q8WXI3 467 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 MARS2Q96GW9 593 aaKnown RBP12.63□□□□□ -0.39
PRKDC-203ENST00000432581 POM121L2Q96KW2 1035 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 CGREF1Q99674 301 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 TMBIM4Q9HC24 238 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 MEPEQ9NQ76 525 aaPredicted RBP12.63□□□□□ -0.39
PRKDC-203ENST00000432581 INIPQ9NRY2 104 aa12.63□□□□□ -0.39
PRKDC-203ENST00000432581 ISPDA4D126 451 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 C5orf49A4QMS7 147 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 GMNCA6NCL1 334 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 H3BSA7 217 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 FOXH1O75593 365 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 UBOX5O94941 541 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 IGF2P01344 180 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 MT-ND1P03886 318 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 F13BP05160 661 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 ADH4P08319 380 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 PCGF2P35227 344 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 WNT5AP41221 380 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 GDI2P50395 445 aaKnown RBP12.62□□□□□ -0.39
PRKDC-203ENST00000432581 UGT2B15P54855 530 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 MTPNP58546 118 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 LCN2P80188 198 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 ZMAT1Q5H9K5 638 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 PRR31Q5SQ13 230 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 THEM4Q5T1C6 240 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 SHISA2Q6UWI4 295 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 TSPYL5Q86VY4 417 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-203ENST00000432581 ZNF101Q8IZC7 436 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 DPP10Q8N608 796 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 KLF14Q8TD94 323 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-203ENST00000432581 SLC26A7Q8TE54 656 aa12.62□□□□□ -0.39
PRKDC-203ENST00000432581 IPCEF1Q8WWN9 437 aaPredicted RBP12.62□□□□□ -0.39
PRKDC-203ENST00000432581 DIRC2Q96SL1 478 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms