RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 BTCP35070 178 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 HSD17B2P37059 387 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 CTRLP40313 264 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 NSG1P42857 185 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 VDAC2P45880 294 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 STX17P56962 302 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 NUP107P57740 925 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 TAS2R19P59542 299 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 GPX6P59796 221 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ACVR1Q04771 509 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 HERPUD1Q15011 391 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 CYTH1Q15438 398 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 CCL15Q16663 113 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 RAET1LQ5VY80 246 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 CARD17Q5XLA6 110 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 TMEM220Q6QAJ8 160 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 CERS6Q6ZMG9 384 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 BIVMQ86UB2 503 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 LHFPL3Q86UP9 236 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 RALGPS2Q86X27 583 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ERI1Q8IV48 349 aaKnown RBP2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF584Q8IVC4 421 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ACOT4Q8N9L9 421 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 FNDC5Q8NAU1 212 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 C20orf203Q8NBC4 194 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 FBXL13Q8NEE6 735 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 B3GNT7Q8NFL0 401 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ANKRD49Q8WVL7 239 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 TSEN15Q8WW01 171 aaKnown RBP2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 OPTNQ96CV9 577 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 IMMP1LQ96LU5 166 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 SORT1Q99523 831 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 CHP1Q99653 195 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 KCTD14Q9BQ13 255 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 NRIP2Q9BQI9 281 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 TMEM59Q9BXS4 323 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ACTR6Q9GZN1 396 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 DEFB129Q9H1M3 183 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 GBA3Q9H227 469 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 C11orf49Q9H6J7 331 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 SLC25A22Q9H936 323 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 NEK6Q9HC98 313 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ADAP2Q9NPF8 381 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 MMP26Q9NRE1 261 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 IL17CQ9P0M4 197 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 MMP17Q9ULZ9 603 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF831Q5JPB2 1677 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 CACNA1AO00555 2505 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 PIEZO1Q92508 2521 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 BRCA2P51587 3418 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 MRC1P22897 1456 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 TOGARAM1Q9Y4F4 1720 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 KIAA0100Q14667 2235 aaKnown RBP2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 FER1L6Q2WGJ9 1857 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 TET2Q6N021 2002 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 RGPD5Q99666 1765 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 RBMY1BA6NDE4 496 aaKnown RBP2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 RBMY1EA6NEQ0 496 aaKnown RBP2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF726A6NNF4 738 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 USP27XA6NNY8 438 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 DLGAP1O14490 977 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 EMC8O43402 210 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 KLHL41O60662 606 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 FGF4P08620 206 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 RBMY1DP0C7P1 496 aaKnown RBP2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 RBMY1A1P0DJD3 496 aaKnown RBP2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 TROVE2P10155 538 aaKnown RBP eCLIP2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 ICAM2P13598 275 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 FUT3P21217 361 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 GABRR1P24046 479 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZBTB25P24278 435 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 CCNCP24863 283 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 RORAP35398 523 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 GPR6P46095 362 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 LYZP61626 148 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 MRPS22P82650 360 aaKnown RBP2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 KIAA0087Q14695 138 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 CHRNA6Q15825 494 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF79Q15937 498 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 VPS26BQ4G0F5 336 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 LY6G6FQ5SQ64 297 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 GPR157Q5UAW9 335 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 Q6ZN92 141 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF620Q6ZNG0 422 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 COX15Q7KZN9 410 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 ASCL5Q7RTU5 278 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 PLA2G4DQ86XP0 818 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 SPAG16Q8N0X2 631 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 PNKDQ8N490 385 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZADH2Q8N4Q0 377 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 CEP112Q8N8E3 955 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 SUMF2Q8NBJ7 301 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF740Q8NDX6 193 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 NPBQ8NG41 125 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR1S2Q8NGQ3 325 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR9G1Q8NH87 305 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 PIBF1Q8WXW3 757 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 ARPC1AQ92747 370 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 SLC38A4Q969I6 547 aa2.14□□□□□ -2.07
HMGB1P27-201ENST00000431429 DUS3LQ96G46 650 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms