RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 GAS2L1Q99501 681 aaPredicted RBP10.21□□□□□ -0.77
USP4-205ENST00000431357 ELOVL3Q9HB03 270 aa10.21□□□□□ -0.77
USP4-205ENST00000431357 MED11Q9P086 117 aa10.21□□□□□ -0.77
USP4-205ENST00000431357 EPHA6Q9UF33 1036 aa10.21□□□□□ -0.77
USP4-205ENST00000431357 OPN4Q9UHM6 478 aa10.21□□□□□ -0.77
USP4-205ENST00000431357 ING1Q9UK53 422 aaPredicted RBP10.21□□□□□ -0.77
USP4-205ENST00000431357 B9D1Q9UPM9 204 aa10.21□□□□□ -0.77
USP4-205ENST00000431357 SESN1Q9Y6P5 492 aa10.21□□□□□ -0.77
USP4-205ENST00000431357 HEATR5AQ86XA9 2040 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 TRAV18A0A075B6X5 111 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 A0A1W2PQD3 144 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 EPOPA6NHQ4 379 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 LILRA5A6NI73 299 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 SUSD5O60279 629 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 RLN1P04808 185 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 GTF2F2P13984 249 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 MAZP56270 477 aaKnown RBP10.21□□□□□ -0.78
USP4-205ENST00000431357 HLXQ14774 488 aaPredicted RBP10.21□□□□□ -0.78
USP4-205ENST00000431357 SGCBQ16585 318 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 C2orf76Q3KRA6 126 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 TEX30Q5JUR7 227 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 NKAIN2Q5VXU1 208 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 GLT8D1Q68CQ7 371 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 KCTD18Q6PI47 426 aaPredicted RBP10.21□□□□□ -0.78
USP4-205ENST00000431357 TMEM65Q6PI78 240 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 TMUB2Q71RG4 321 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 CHMP1BQ7LBR1 199 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 SCARB1Q8WTV0 552 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 CCDC107Q8WV48 283 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 METTL21AQ8WXB1 218 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 LRRC61Q9BV99 259 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 CDCP1Q9H5V8 836 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 PDE7BQ9NP56 450 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 PNO1Q9NRX1 252 aaKnown RBP10.21□□□□□ -0.78
USP4-205ENST00000431357 CLEC1BQ9P126 229 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 PRELID3BQ9Y3B1 194 aa10.21□□□□□ -0.78
USP4-205ENST00000431357 TSPAN4O14817 238 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 SLC25A12O75746 678 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 OR6A2O95222 327 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 HRGP04196 525 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 PGCP20142 388 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 ZP3P21754 424 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 MAOBP27338 520 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 RPL27P61353 136 aaKnown RBP10.2□□□□□ -0.78
USP4-205ENST00000431357 ROM1Q03395 351 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 ZNF117Q03924 483 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 PLA2G7Q13093 441 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 CSRP2Q16527 193 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 MEP1BQ16820 701 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 FAM166AQ6J272 317 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 METTL27Q8N6F8 245 aaPredicted RBP10.2□□□□□ -0.78
USP4-205ENST00000431357 ZNF784Q8NCA9 323 aaPredicted RBP10.2□□□□□ -0.78
USP4-205ENST00000431357 OR51A4Q8NGJ6 313 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 OR8K3Q8NH51 312 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 GPX8Q8TED1 209 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 PCNPQ8WW12 178 aaKnown RBP10.2□□□□□ -0.78
USP4-205ENST00000431357 TMEM131Q92545 1883 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 OR1F2PQ96R84 312 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 ADOQ96SZ5 270 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 NKX2-4Q9H2Z4 354 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 APMAPQ9HDC9 416 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 LANCL2Q9NS86 450 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 VSX1Q9NZR4 365 aaPredicted RBP10.2□□□□□ -0.78
USP4-205ENST00000431357 KCNG2Q9UJ96 466 aa10.2□□□□□ -0.78
USP4-205ENST00000431357 TMEM184BQ9Y519 407 aaPredicted RBP10.2□□□□□ -0.78
USP4-205ENST00000431357 LAMA2P24043 3122 aaKnown RBP10.2□□□□□ -0.78
USP4-205ENST00000431357 PRSS37A4D1T9 235 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 HCRTR2O43614 444 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 HLA-DQA2P01906 255 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 IGKV3-11P04433 115 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 CD2P06729 351 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 HOXD4P09016 255 aaPredicted RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 ACSM4P0C7M7 580 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 CD37P11049 281 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 GP1BBP13224 206 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 IL12BP29460 328 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 CCKBRP32239 447 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 TAS2R19P59542 299 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 FLI1Q01543 452 aaPredicted RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 ELOCQ15369 112 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 Q3ZCU0 254 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 RGS7BPQ6MZT1 257 aaPredicted RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 STEAP1BQ6NZ63 245 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 NHLRC1Q6VVB1 395 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ZNF454Q8N9F8 522 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 TMEM229BQ8NBD8 167 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 OR52B4Q8NGK2 314 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ADIPOR1Q96A54 375 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 AMELYQ99218 206 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 SLC38A3Q99624 504 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 POTEKPQ9BYX7 375 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ULBP3Q9BZM4 244 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 SLCO5A1Q9H2Y9 848 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 IFT46Q9NQC8 304 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 SOHLH2Q9NX45 425 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 CKLFQ9UBR5 152 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 ZNF107Q9UII5 783 aaPredicted RBP10.19□□□□□ -0.78
USP4-205ENST00000431357 DHDHQ9UQ10 334 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 A0A0A6YYH2 397 aa10.19□□□□□ -0.78
USP4-205ENST00000431357 A0A1W2PPC4 97 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms