RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 HTR3CQ8WXA8 447 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 OR8D1Q8WZ84 308 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 C11orf52Q96A22 123 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 C12orf43Q96C57 262 aaKnown RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 TUBGCP3Q96CW5 907 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 PPP1R16AQ96I34 528 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 FMO2Q99518 471 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SLC30A2Q9BRI3 323 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 FEM1AQ9BSK4 669 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 NEUROG2Q9H2A3 272 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 XKR8Q9H6D3 395 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 KAT8Q9H7Z6 458 aaKnown RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 ANKHQ9HCJ1 492 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 C20orf96Q9NUD7 363 aaPredicted RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SMPD3Q9NY59 655 aaPredicted RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 KLRF1Q9NZS2 232 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 APOBEC3BQ9UH17 382 aaKnown RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 LGALS13Q9UHV8 139 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF221Q9UK13 617 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 FZR1Q9UM11 496 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 ERVW-1Q9UQF0 538 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SCML2Q9UQR0 700 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 KLHDC2Q9Y2U9 406 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 DHRS7Q9Y394 339 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 MRPS18CQ9Y3D5 142 aaKnown RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 OR10H1Q9Y4A9 318 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 UGT2A1Q9Y4X1 527 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 STYXL1Q9Y6J8 313 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 A0A087WXM4 84 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 TUBAL3A6NHL2 446 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 SAGE2PA6NJ88 616 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 PCP4L1A6NKN8 68 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 WASHC1A8K0Z3 465 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 C12orf71A8MTZ7 269 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 A8MU76 341 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 NPIPA2E9PIF3 369 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 H3BSA7 217 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 NTN3O00634 580 aaPredicted RBP3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ABCD4O14678 606 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 TFECO14948 347 aaPredicted RBP3.42□□□□□ -1.86
HMGB3-203ENST00000430118 HCRTO43612 131 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 GPRIN2O60269 458 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 GMDSO60547 372 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 JAK2O60674 1132 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 EDF1O60869 148 aaKnown RBP3.42□□□□□ -1.86
HMGB3-203ENST00000430118 MTX2O75431 263 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 CLPXO76031 633 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 H6PDO95479 791 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 DHFRP00374 187 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 GOT2P00505 430 aaKnown RBP3.42□□□□□ -1.86
HMGB3-203ENST00000430118 IGHEP01854 428 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 UGT2B4P06133 528 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 HBQ1P09105 142 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ALPIP09923 528 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 CYP11B1P15538 503 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 TNNI1P19237 187 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 LMO2P25791 158 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 CCKARP32238 428 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 HMGCLP35914 325 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 HPCAL1P37235 193 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 SULT1E1P49888 294 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 RAB13P51153 203 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ATP12AP54707 1039 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 TMBIM6P55061 237 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 AQP4P55087 323 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 GPX6P59796 221 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 SPCS3P61009 180 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 COPZ1P61923 177 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 BTG1P62324 171 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 SRYQ05066 204 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 CD300CQ08708 224 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ZP4Q12836 540 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 EXOSC2Q13868 293 aaKnown RBP3.42□□□□□ -1.86
HMGB3-203ENST00000430118 FASTKQ14296 549 aaKnown RBP3.42□□□□□ -1.86
HMGB3-203ENST00000430118 CAPRIN1Q14444 709 aaKnown RBP3.42□□□□□ -1.86
HMGB3-203ENST00000430118 MESDQ14696 234 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 PDK2Q15119 407 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ELOCQ15369 112 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 SPA17Q15506 151 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 DEFB133Q30KQ1 61 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF718Q3SXZ3 478 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 DCAF12Q5T6F0 453 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 SEL1L3Q68CR1 1132 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 TMEM215Q68D42 235 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ASPHD2Q6ICH7 369 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ANKRD26P1Q6NSI1 321 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 KIAA1161Q6NSJ0 714 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF544Q6NX49 715 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 RFWD3Q6PCD5 774 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF562Q6V9R5 426 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 ZYG11AQ6WRX3 759 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 FRRS1Q6ZNA5 592 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 CUZD1Q86UP6 607 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 SLC22A9Q8IVM8 553 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 GPD1LQ8N335 351 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 SNX31Q8N9S9 440 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 OR13C2Q8NGS9 318 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 PNPT1Q8TCS8 783 aaKnown RBP3.42□□□□□ -1.86
HMGB3-203ENST00000430118 SPPL2AQ8TCT8 520 aa3.42□□□□□ -1.86
HMGB3-203ENST00000430118 TCP10LQ8TDR4 215 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms