RNA–Protein interactions for RNA: ENST00000430086.1

CCDC88A-206, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 3

Gene CCDC88A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-206ENST00000430086 CSNK1A1LQ8N752 337 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 OR9A4Q8NGU2 314 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 OR6N2Q8NGY6 317 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 MYDGFQ969H8 173 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 MS4A14Q96JA4 679 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 SH3GL1Q99961 368 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 ELOVL4Q9GZR5 314 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 DEFB129Q9H1M3 183 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 FGF20Q9NP95 211 aaPredicted RBP4□□□□□ -1.77
CCDC88A-206ENST00000430086 ABCB10Q9NRK6 738 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 MS4A12Q9NXJ0 267 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 ANAPC11Q9NYG5 84 aa4□□□□□ -1.77
CCDC88A-206ENST00000430086 LSM7Q9UK45 103 aaKnown RBP4□□□□□ -1.77
CCDC88A-206ENST00000430086 SAMD4AQ9UPU9 718 aaKnown RBP4□□□□□ -1.77
CCDC88A-206ENST00000430086 MGAT4DA6NG13 374 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 SULT2B1O00204 365 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 CDC7O00311 574 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 SCN2BO60939 215 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ENTPD5O75356 428 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 NDUFS6O75380 124 aaKnown RBP3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 FGF1P05230 155 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 GLAP06280 429 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 MGMTP16455 207 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 HTR2CP28335 458 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ARR3P36575 388 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ACVR1BP36896 505 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ATP5J2P56134 94 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 STX17P56962 302 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 MYL6P60660 151 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 PUDPQ08623 228 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 SLC10A7Q0GE19 358 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 IL18R1Q13478 541 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 PLEKHG7Q6ZR37 379 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 Q6ZSR3 168 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ZNF621Q6ZSS3 439 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 GDPD3Q7L5L3 318 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 OR2W3Q7Z3T1 314 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ABHD12BQ7Z5M8 362 aaPredicted RBP3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 NELFCDQ8IXH7 590 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 Q8N7P7 452 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 CATSPER1Q8NEC5 780 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 CCDC26Q8TAB7 109 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 NUBPLQ8TB37 319 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 SLC7A13Q8TCU3 470 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 CXorf40AQ8TE69 158 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 PHYHIPLQ96FC7 376 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ZNF414Q96IQ9 312 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 CELF6Q96J87 481 aaKnown RBP3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ZIM3Q96PE6 472 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ALS2CR12Q96Q35 445 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 CYP2S1Q96SQ9 504 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 CTRCQ99895 268 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 PELOQ9BRX2 385 aaKnown RBP3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 CNPY3Q9BT09 278 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 SPZ1Q9BXG8 430 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 TMEM59Q9BXS4 323 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 MAP1LC3CQ9BXW4 147 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ANGPTL4Q9BY76 406 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ULBP2Q9BZM5 246 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 SLC38A10Q9HBR0 1119 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 CD209Q9NNX6 404 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 MEPEQ9NQ76 525 aaPredicted RBP3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 OR2S2Q9NQN1 319 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 EURLQ9NYK6 297 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 EMC3Q9P0I2 261 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 UBQLN1Q9UMX0 589 aaKnown RBP3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 YARS2Q9Y2Z4 477 aaKnown RBP3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 HYOU1Q9Y4L1 999 aa3.99□□□□□ -1.77
CCDC88A-206ENST00000430086 ADGRA3Q8IWK6 1321 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 A0A0A6YYH2 397 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 EPOPA6NHQ4 379 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 A6NJ64 397 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 RNASEK-C17orf49H0YIS7 233 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 CCL21O00585 134 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 GMDSO60547 372 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 AHSA1O95433 338 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 CD55P08174 381 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 PSMC3P17980 439 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 NPR2P20594 1047 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 ZBTB25P24278 435 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 IVDP26440 423 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 IL2RGP31785 369 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 EPHX2P34913 555 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 DDOSTP39656 456 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 SSR4P51571 173 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 GPX6P59796 221 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 CHRNB3Q05901 458 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 SIGLEC14Q08ET2 396 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 SERTAD2Q14140 314 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 TRAM2Q15035 370 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 TSC22D1Q15714 1073 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 CARD16Q5EG05 197 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 ASCL5Q7RTU5 278 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 FBXO16Q8IX29 292 aaPredicted RBP3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 ACOT4Q8N9L9 421 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 OR56A4Q8NGH8 313 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 OR1S2Q8NGQ3 325 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 OR2G2Q8NGZ5 317 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 LGALS14Q8TCE9 139 aa3.98□□□□□ -1.77
CCDC88A-206ENST00000430086 ACOT11Q8WXI4 607 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms