RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MTFP1Q9UDX5 166 aa7.88□□□□□ -1.15
GABPB1-205ENST00000429662 EPHA6Q9UF33 1036 aa7.88□□□□□ -1.15
GABPB1-205ENST00000429662 MRM2Q9UI43 246 aaKnown RBP7.88□□□□□ -1.15
GABPB1-205ENST00000429662 ZNF107Q9UII5 783 aaPredicted RBP7.88□□□□□ -1.15
GABPB1-205ENST00000429662 PLCL2Q9UPR0 1127 aa7.88□□□□□ -1.15
GABPB1-205ENST00000429662 ERVK-19Q9WJR5 959 aa7.88□□□□□ -1.15
GABPB1-205ENST00000429662 SPTAN1Q13813 2472 aaKnown RBP7.88□□□□□ -1.15
GABPB1-205ENST00000429662 A0A0A6YYC8 382 aaPredicted RBP7.87□□□□□ -1.15
GABPB1-205ENST00000429662 A0A0A6YYH2 397 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 LOC100996750A0A140TA64 210 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 A0A1W2PPL8 197 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 TMEM72A0PK05 275 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 OR2M5A3KFT3 312 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 MEGF11A6BM72 1044 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 A6NJ64 397 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 ZSCAN5BA6NJL1 495 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 OR4C45A6NMZ5 311 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 BLOC1S5-TXNDC5H3BN57 136 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 I3L1I5 382 aaPredicted RBP7.87□□□□□ -1.15
GABPB1-205ENST00000429662 I3L521 148 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 MAGEB4O15481 346 aaPredicted RBP7.87□□□□□ -1.15
GABPB1-205ENST00000429662 ZNF264O43296 627 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 CDC40O60508 579 aaKnown RBP eCLIP7.87□□□□□ -1.15
GABPB1-205ENST00000429662 EIF4E2O60573 245 aaKnown RBP7.87□□□□□ -1.15
GABPB1-205ENST00000429662 SEMA4FO95754 770 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 ABHD16AO95870 558 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 MT-ATP6P00846 226 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 SYPP08247 313 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 AKAIN1P0CW23 69 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 ST6GAL1P15907 406 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 ALOX5APP20292 161 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 CDK2P24941 298 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 CALCRP30988 508 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 AQP2P41181 271 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 SELENOPP49908 381 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 TPMTP51580 245 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 NANOS3P60323 173 aaKnown RBP7.87□□□□□ -1.15
GABPB1-205ENST00000429662 HHEXQ03014 270 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 LTBQ06643 244 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 SKP2Q13309 424 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 CBFBQ13951 182 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 AANATQ16613 207 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 EEF1A1P5Q5VTE0 462 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 PMS2CLQ68D20 193 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 KIAA0895LQ68EN5 471 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 ANKRD16Q6P6B7 361 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 C5orf46Q6UWT4 87 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 Q6ZTK2 550 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 SYT9Q86SS6 491 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 IZUMO1Q8IYV9 350 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 ZNF676Q8N7Q3 588 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 BEST4Q8NFU0 473 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 OR6N1Q8NGY5 312 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 OR2G2Q8NGZ5 317 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 OR4C3Q8NH37 302 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 CCDC107Q8WV48 283 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 RGP1Q92546 391 aaPredicted RBP7.87□□□□□ -1.15
GABPB1-205ENST00000429662 PNPLA2Q96AD5 504 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 RBP7Q96R05 134 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 INTS14Q96SY0 518 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 KRTAP4-6Q9BYQ5 205 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 TTTY10Q9BZA0 68 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 ADAM19Q9H013 955 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 SLC25A18Q9H1K4 315 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 SLCO5A1Q9H2Y9 848 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 SCPEP1Q9HB40 452 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 MED11Q9P086 117 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 FRRS1LQ9P0K9 344 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 PIPOXQ9P0Z9 390 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 DKK4Q9UBT3 224 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 ZNF69Q9UC07 566 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 GLS2Q9UI32 602 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 CA5BQ9Y2D0 317 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 TMA7Q9Y2S6 64 aaKnown RBP7.87□□□□□ -1.15
GABPB1-205ENST00000429662 SPEF1Q9Y4P9 236 aa7.87□□□□□ -1.15
GABPB1-205ENST00000429662 A0A087WV48 116 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 SPTY2D1-AS1A0A0U1RR47 76 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 A0A1B0GVT2 93 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 A0A1W2PQD3 144 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 GGT3PA6NGU5 568 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 FRG2CA6NGY1 282 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 MCRIP1C9JLW8 97 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 XKRYO14609 159 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 GNB5O14775 395 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 BET1O15155 118 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 ATXN7O15265 892 aaPredicted RBP7.86□□□□□ -1.15
GABPB1-205ENST00000429662 B3GALNT1O75752 331 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 MPC2O95563 127 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 IGLV3-19P01714 112 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 OR8G3PP0DMU2 310 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 PPP3CBP16298 524 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 ITPKBP27987 946 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 CSF2RBP32927 897 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 RORAP35398 523 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 RAD52P43351 418 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 ACTBP60709 375 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 ACTG1P63261 375 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 TAGLNQ01995 201 aaKnown RBP7.86□□□□□ -1.15
GABPB1-205ENST00000429662 GRM7Q14831 915 aa7.86□□□□□ -1.15
GABPB1-205ENST00000429662 POU4F3Q15319 338 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms