RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SAV1Q9H4B6 383 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 TRABDQ9H4I3 376 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 NOL11Q9H8H0 719 aaKnown RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ANKZF1Q9H8Y5 726 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 COG4Q9H9E3 785 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 CDH20Q9HBT6 801 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF160Q9HCG1 818 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 CMTM6Q9NX76 183 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 TAS2R3Q9NYW6 316 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 IL17CQ9P0M4 197 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 TXNDC16Q9P2K2 825 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 PSMC3IPQ9P2W1 217 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF282Q9UDV7 671 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ENOPH1Q9UHY7 261 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 RWDD2AQ9UIY3 292 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 RPS6KA6Q9UK32 745 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 NOCTQ9UK39 431 aaKnown RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 ELF5Q9UKW6 265 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 MRPS7Q9Y2R9 242 aaKnown RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 NAALAD2Q9Y3Q0 740 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 LRRC42Q9Y546 428 aa3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 FBN1P35555 2871 aaKnown RBP3.77□□□□□ -1.81
HMGB3P5-201ENST00000428894 OR6C70A6NIJ9 312 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF98A6NK75 572 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 OR2AG2A6NM03 316 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 KLLNB2CW77 178 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 NPIPA5E9PKD4 350 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 G3V2L1 256 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 K7EQD1 137 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 BTN3A3O00478 584 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 SLC22A1O15245 554 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 DENRO43583 198 aaKnown RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 FMO6PO60774 539 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 ALOX12BO75342 701 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 DCTN3O75935 186 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 SLCO2B1O94956 709 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 MBP02144 154 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 MELTFP08582 738 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 SAGP10523 405 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 DBTP11182 482 aaKnown RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 RALBP11234 206 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 NQO1P15559 274 aaKnown RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 TCN1P20061 433 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 BCL3P20749 454 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 MIPP30301 263 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 SHMT2P34897 504 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 HMGCLP35914 325 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 GP5P40197 560 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 NPY2RP49146 381 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 GBX2P52951 348 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 CASP9P55211 416 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 ILF2Q12905 390 aaKnown RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 FADDQ13158 208 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 PMS2P3Q13401 168 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 CAMK4Q16566 473 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 STX1AQ16623 288 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 DEFB113Q30KQ7 82 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 TOR1AIP1Q5JTV8 583 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 TCHHL1Q5QJ38 904 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 ATAD3BQ5T9A4 648 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 DUPD1Q68J44 220 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 PRMT9Q6P2P2 845 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 DEGS2Q6QHC5 323 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 SPESP1Q6UW49 350 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 MSANTD1Q6ZTZ1 278 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 TAS2R42Q7RTR8 314 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 RASGEF1AQ8N9B8 481 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 TTC29Q8NA56 475 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 LRRC20Q8TCA0 184 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 PSMF1Q92530 271 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 NRGNQ92686 78 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 LINC00615Q96LM1 132 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF597Q96LX8 424 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 TRNT1Q96Q11 434 aaKnown RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 SMR3AQ99954 134 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 FERMT1Q9BQL6 677 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 OR51V1Q9H2C8 321 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 FAM60AQ9NP50 221 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 UFSP2Q9NUQ7 469 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 DNAJC11Q9NVH1 559 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 NPIPA1Q9UND3 350 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 PLEKHA6Q9Y2H5 1048 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 ARL2BPQ9Y2Y0 163 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 RBMX2Q9Y388 322 aaKnown RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 SAMHD1Q9Y3Z3 626 aaKnown RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 V9GYQ6 96 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 DNAJC13O75165 2243 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 SNRNP200O75643 2136 aaKnown RBP3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 MXRA5Q9NR99 2828 aa3.76□□□□□ -1.81
HMGB3P5-201ENST00000428894 ARID1AO14497 2285 aa3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 CHD3Q12873 2000 aaKnown RBP3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 A0A0J9YY10 115 aa3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 GLYATL1P3A0A0U1RQE8 302 aa3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 A0A1W2PPK0 400 aa3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 A0A1W2PQ72 361 aa3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 A0A1W2PRG6 482 aa3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 CCDC160A6NGH7 325 aa3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 RNF212BA8MTL3 300 aa3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 FAM25AB3EWG3 89 aa3.75□□□□□ -1.81
HMGB3P5-201ENST00000428894 FAM25CB3EWG5 89 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms