RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 MT-ATP6P00846 226 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 HLA-DQA2P01906 255 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 CD40LGP29965 261 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 TGFBR1P36897 503 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 TDGF1P3P51864 188 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 PPP5CP53041 499 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 CDH11P55287 796 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 PRPS1P60891 318 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 SLC35A1P78382 337 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 IRF3Q14653 427 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 OR2G6Q5TZ20 316 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 AADACL4Q5VUY2 407 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 LRRC18Q8N456 261 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 LINC00471Q8N535 108 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 ARIH2OSQ8N7S6 290 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 ZFP41Q8N8Y5 198 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 ASB10Q8WXI3 467 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 DDOQ99489 341 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 NXF2Q9GZY0 626 aaKnown RBP8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 DCSTAMPQ9H295 470 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 MMP27Q9H306 513 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 EMC7Q9NPA0 242 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 PRSS50Q9UI38 385 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 PCDHGB7Q9Y5F8 929 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 FAM215AQ9Y5M1 114 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 FLVCR1Q9Y5Y0 555 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 SPG11Q96JI7 2443 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 A0A096LPE4 126 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 A0A1W2PPZ6 126 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 A0A1W2PRG6 482 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 RIIAD1A6NNX1 92 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 PRR23D1E9PI22 279 aaPredicted RBP8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 TFP02787 698 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 PRR23D2P0DMB1 279 aaPredicted RBP8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 DBTP11182 482 aaKnown RBP8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 SPI1P17947 270 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 PTGS2P35354 604 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 PRSS12P56730 875 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 ST3GAL4Q11206 333 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 CDSNQ15517 529 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 EIF2S3LQ2VIR3 472 aaKnown RBP8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 JAZF1Q86VZ6 243 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 DEPDC4Q8N2C3 294 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 PROKR2Q8NFJ6 384 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 SLC25A43Q8WUT9 341 aaPredicted RBP8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 LIPHQ8WWY8 451 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 TEAD3Q99594 435 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 TXNIPQ9H3M7 391 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 ISG20L2Q9H9L3 353 aaKnown RBP8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 SEC61A2Q9H9S3 476 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 SLC25A19Q9HC21 320 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 B3GALT5Q9Y2C3 310 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 SPIN1Q9Y657 262 aaPredicted RBP8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 ABCA12Q86UK0 2595 aa8.43□□□□□ -1.06
HMGCLL1-206ENST00000428842 SLC22A23A1A5C7 686 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 CCDC182A6NF36 153 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 SLC22A20A6NK97 555 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 ATXN7O15265 892 aaPredicted RBP8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 AIREO43918 545 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 ATP6V1G1O75348 118 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 IGHG3P01860 377 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 ETV1P50549 477 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 TIGD6Q17RP2 521 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 TSPO2Q5TGU0 170 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 ZNF324BQ6AW86 544 aaPredicted RBP8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 ARHGAP11AQ6P4F7 1023 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 GFRALQ6UXV0 394 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 PXKQ7Z7A4 578 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 SNX29P2Q8IUI4 249 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 OR8J1Q8NGP2 316 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 MCFD2Q8NI22 146 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 SLC7A6Q92536 515 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 RNFT2Q96EX2 444 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 GPR137Q96N19 417 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 SLC38A2Q96QD8 506 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 HEATR1Q9H583 2144 aaKnown RBP8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 CRLF2Q9HC73 371 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 COPS3Q9UNS2 423 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 USP9YO00507 2555 aaPredicted RBP8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 PRSS37A4D1T9 235 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 QDPRP09417 244 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 GADD45AP24522 165 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 GRK5P34947 590 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 CSNK2A1P68400 391 aaPredicted RBP8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 ZNF404Q494X3 552 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 USP43Q70EL4 1123 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 CHMP1BQ7LBR1 199 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 CADM3Q8N126 398 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 MEIOBQ8N635 442 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 FGFBP3Q8TAT2 258 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 RNF128Q8TEB7 428 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 OR2M2Q96R28 347 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 OR5M11Q96RB7 305 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 RBM24Q9BX46 236 aaKnown RBP8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 SLC7A10Q9NS82 523 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 TRAPPC4Q9Y296 219 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 FBN2P35556 2912 aa8.42□□□□□ -1.06
HMGCLL1-206ENST00000428842 A0A1W2PPL8 197 aa8.41□□□□□ -1.06
HMGCLL1-206ENST00000428842 ISPDA4D126 451 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms