RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 MMP28Q9H239 520 aa9.31□□□□□ -0.92
HDAC9-210ENST00000428307 SLC22A13Q9Y226 551 aa9.31□□□□□ -0.92
HDAC9-210ENST00000428307 MRPS7Q9Y2R9 242 aaKnown RBP9.31□□□□□ -0.92
HDAC9-210ENST00000428307 PHYHO14832 338 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 DOK2O60496 412 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 FZD7O75084 574 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 DNASE1L1P49184 302 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 CLDN12P56749 244 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 RPS15P62841 145 aaKnown RBP9.3□□□□□ -0.92
HDAC9-210ENST00000428307 SPEM2Q0P670 501 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 SSPNQ14714 243 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 WDR38Q5JTN6 314 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 UEVLDQ8IX04 471 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 SLC26A10Q8NG04 563 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 GFI1Q99684 422 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 ZPBPQ9BS86 351 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 COMMD4Q9H0A8 199 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 TCF7L1Q9HCS4 588 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 P4HTMQ9NXG6 502 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 TEKT2Q9UIF3 430 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 EXPH5Q8NEV8 1989 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 CENPBD1B2RD01 187 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-210ENST00000428307 ZIC3O60481 467 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 MT-CO3P00414 261 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 IGHEP01854 428 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 LIFP15018 202 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 NPR2P20594 1047 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 ADH6P28332 368 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 P2RY4P51582 365 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 SELENBP1Q13228 472 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 TMEM164Q5U3C3 297 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 KCTD18Q6PI47 426 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-210ENST00000428307 DNM1P34Q6PK57 102 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 DCXRQ7Z4W1 244 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 DNAAF1Q8NEP3 725 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 ASB17Q8WXJ9 295 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 PHYHIPQ92561 330 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 TMEM106AQ96A25 262 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 ZBTB8AQ96BR9 441 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 DCBLD2Q96PD2 775 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 RBP7Q96R05 134 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 ABHD1Q96SE0 405 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 HDHD2Q9H0R4 259 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 FREM3P0C091 2139 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 ASPMQ8IZT6 3477 aa9.3□□□□□ -0.92
HDAC9-210ENST00000428307 A0A0G2JMM0 328 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 A0A1W2PPB8 328 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 A0A1W2PRS3 328 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 TMEM212A6NML5 194 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 KIR3DP1A8MWS1 328 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 EIF1AYO14602 144 aaKnown RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 MAS1P04201 325 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 CD63P08962 238 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ZNF806P0C7X5 589 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ICAM2P13598 275 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ZNF43P17038 809 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 KIR3DL2P43630 455 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 EIF1AXP47813 144 aaKnown RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 PITPNBP48739 271 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 INPP1P49441 399 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 GPR85P60893 370 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 MFGE8Q08431 387 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 MFAP5Q13361 173 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ASAH1Q13510 395 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 TIGD3Q6B0B8 471 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 NHLRC1Q6VVB1 395 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 STAC2Q6ZMT1 411 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 TMPPEQ6ZT21 453 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ASB18Q6ZVZ8 466 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 GTPBP8Q8N3Z3 284 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 IL17RDQ8NFM7 739 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 GPR148Q8TDV2 347 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 C4orf45Q96LM5 186 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ZFP3Q96NJ6 502 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 WACQ9BTA9 647 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 SPRY4Q9C004 299 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 SEC61A2Q9H9S3 476 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 SH2D2AQ9NP31 389 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 CENPMQ9NSP4 180 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 KLHL13Q9P2N7 655 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 DKKL1Q9UK85 242 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 FBXL3Q9UKT7 428 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 LRP12Q9Y561 859 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 MRPS18BQ9Y676 258 aaKnown RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 TRAV8-7A0A075B6U6 113 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 IGHV3-15A0A0B4J1V0 119 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 A0A1W2PNV4 684 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 OR2M5A3KFT3 312 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 IFITM5A6NNB3 132 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 H0YC42 278 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 LANCL1O43813 399 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 KHDRBS3O75525 346 aaKnown RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 PTGS2P35354 604 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 DLSTP36957 453 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 RIDAP52758 137 aaKnown RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 DSCR4P56555 118 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 CLRN1P58418 232 aa9.29□□□□□ -0.92
HDAC9-210ENST00000428307 OC90Q02509 493 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-210ENST00000428307 ROM1Q03395 351 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms