RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 MT-ND4P03905 459 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 PITPNBP48739 271 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 P2RX1P51575 399 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 YIF1BQ5BJH7 314 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 TMEM17Q86X19 198 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 FBXO17Q96EF6 278 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 DCLRE1CQ96SD1 692 aaKnown RBP9.68□□□□□ -0.86
TCOF1-204ENST00000427724 SRRQ9GZT4 340 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 FKRPQ9H9S5 495 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 ACOXLQ9NUZ1 547 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 TECTAO75443 2155 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 LOC285556D6RIA3 1793 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 A0A096LPE4 126 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 A0A1W2PPZ6 126 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 M0R1B8 84 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 INSM1Q01101 510 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-204ENST00000427724 MELKQ14680 651 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 GXYLT1Q4G148 440 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 CDONQ4KMG0 1287 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 UNQ6494/PRO21346Q6UXR6 183 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 VN1R4Q7Z5H5 301 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 SLC51BQ86UW2 128 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 OR5L1Q8NGL2 311 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 KLHL15Q96M94 604 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 CHRNA9Q9UGM1 479 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 KLK13Q9UKR3 277 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 OTOFQ9HC10 1997 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 A0A087WUU8 490 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 A0A1B0GWA3 101 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 RAD51DO75771 328 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 GZMMP51124 257 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 PCBD1P61457 104 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 OPCMLQ14982 345 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 LAIR2Q6ISS4 152 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 GRINAQ7Z429 371 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 OR13C2Q8NGS9 318 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 SLC25A43Q8WUT9 341 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-204ENST00000427724 SLC25A46Q96AG3 418 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 C19orf43Q9BQ61 176 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 VSX1Q9NZR4 365 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-204ENST00000427724 FBXL3Q9UKT7 428 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 HRH3Q9Y5N1 445 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 PCM1Q15154 2024 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 OR6C76A6NM76 312 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 ANKRD30BLA7E2S9 258 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 A8MVM7 634 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 H7C1C5 153 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 SGCEO43556 437 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 CREBL2O60519 120 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-204ENST00000427724 HPP00738 406 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 FBXO45P0C2W1 286 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 NAT2P11245 290 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 EDN3P14138 238 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 HLA-DMAP28067 261 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 SHC1P29353 583 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 BSGP35613 385 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 PSMB10P40306 273 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 AQP2P41181 271 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 LCN6P62502 163 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 EXOSC2Q13868 293 aaKnown RBP9.68□□□□□ -0.86
TCOF1-204ENST00000427724 EIF2S3LQ2VIR3 472 aaKnown RBP9.68□□□□□ -0.86
TCOF1-204ENST00000427724 NKAPLQ5M9Q1 402 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 HES5Q5TA89 166 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 ZBTB37Q5TC79 503 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 SERPINA12Q8IW75 414 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 GIMAP1Q8WWP7 306 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 NINJ1Q92982 152 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 SLC19A3Q9BZV2 496 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 DUSP22Q9NRW4 184 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 BABAM2Q9NXR7 383 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 NTNG1Q9Y2I2 539 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 THADAQ6YHU6 1953 aa9.68□□□□□ -0.86
TCOF1-204ENST00000427724 ZSWIM8A7E2V4 1837 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF705EA8MWA4 302 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-204ENST00000427724 FCMRO60667 390 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 HEXAP06865 529 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 HOXA6P31267 233 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 OR3A2P47893 321 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 KISS1RQ969F8 398 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-204ENST00000427724 CNRIP1Q96F85 164 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-204ENST00000427724 CPNE2Q96FN4 548 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-204ENST00000427724 S100A16Q96FQ6 103 aaKnown RBP9.67□□□□□ -0.86
TCOF1-204ENST00000427724 C4orf36Q96KX1 117 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 MN1Q10571 1320 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-204ENST00000427724 PKDREJQ9NTG1 2253 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 IGHV3-64DA0A0J9YX35 117 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 TRIM64A6NGJ6 449 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 SHISA8B8ZZ34 492 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 SIX6O95475 246 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 RAF1P04049 648 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 CBX5P45973 191 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 PNLIPRP2P54317 469 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 SLC36A2Q495M3 483 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 ACSM3Q53FZ2 586 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 NKAIN4Q8IVV8 208 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 TMEM255BQ8WV15 326 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 TTC9Q92623 222 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 FN3KQ9H479 309 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 ANKUB1A6NFN9 424 aa9.67□□□□□ -0.86
TCOF1-204ENST00000427724 ARPC1BO15143 372 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms