RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OLFML2AQ68BL7 652 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 UNQ6126/PRO20091Q6UXV3 157 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 MSANTD1Q6ZTZ1 278 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 PARP8Q8N3A8 854 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 C10orf53Q8N6V4 93 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 ZNF283Q8N7M2 679 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 OR4F5Q8NH21 305 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 MCHR2Q969V1 340 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 ITCHQ96J02 903 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 POM121L2Q96KW2 1035 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 DCLRE1CQ96SD1 692 aaKnown RBP14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 RMND5AQ9H871 391 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 TMEM106BQ9NUM4 274 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 DCAF16Q9NXF7 216 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 EIF3KQ9UBQ5 218 aaKnown RBP14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 IL20RAQ9UHF4 553 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 TRIM33Q9UPN9 1127 aa14.08□□□□□ -0.16
CHCHD3-202ENST00000423635 FAM181BA6NEQ2 426 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 CCNOP22674 350 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 STOMP27105 288 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 WNT5AP41221 380 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 CDH12P55289 794 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 PAX2Q02962 417 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 FADDQ13158 208 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 JAZF1Q86VZ6 243 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 SLC25A40Q8TBP6 338 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 GEMIN6Q8WXD5 167 aaKnown RBP14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 UPRTQ96BW1 309 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 SPATA5L1Q9BVQ7 753 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 OR2J1Q9GZK6 312 aa14.07□□□□□ -0.16
CHCHD3-202ENST00000423635 C5orf58C9J3I9 102 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 CLIC1O00299 241 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 HOXA3O43365 443 aaPredicted RBP14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 ICMTO60725 284 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 NDUFA7O95182 113 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 NGFP01138 241 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 CPT2P23786 658 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 NCALDP61601 193 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 MELKQ14680 651 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 ZMAT1Q5H9K5 638 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 PABPC1L2AQ5JQF8 200 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 SPATA46Q5T0L3 261 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 FAM205BPQ63HN1 556 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 ASPHD2Q6ICH7 369 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 LRRN1Q6UXK5 716 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 LRRC18Q8N456 261 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 SAMD8Q96LT4 415 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 SEPHS2Q99611 448 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 RBM4BQ9BQ04 359 aaKnown RBP14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 WFDC6Q9BQY6 131 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 MRPL13Q9BYD1 178 aaKnown RBP14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 SLC19A3Q9BZV2 496 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 RAD21L1Q9H4I0 556 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 WDR55Q9H6Y2 383 aaPredicted RBP14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 EVA1AQ9H8M9 152 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 SIAEQ9HAT2 523 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 OR5V1Q9UGF6 321 aa14.06□□□□□ -0.16
CHCHD3-202ENST00000423635 KMT2CQ8NEZ4 4911 aaKnown RBP14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 LOC100509620A0A075B734 347 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 CLPSL1A2RUU4 121 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 SRRM5B3KS81 715 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 H3BSA7 217 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 WNT2P09544 360 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 IDO1P14902 403 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 EPHA3P29320 983 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 ZNF84P51523 738 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 ZNF133P52736 654 aaPredicted RBP14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 RAG2P55895 527 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 BTG1P62324 171 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 TNFAIP6P98066 277 aaPredicted RBP14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 RELBQ01201 579 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 HSF2Q03933 536 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 HNRNPA0Q13151 305 aaKnown RBP14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 CDK5R2Q13319 367 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 ZMYND11Q15326 602 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 ZNF74Q16587 644 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 ESCO2Q56NI9 601 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 BRICD5Q6PL45 260 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 KRT73Q86Y46 540 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 HIPK4Q8NE63 616 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 GTF2H4Q92759 462 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 PAIP1Q9H074 479 aaKnown RBP14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 MSL2Q9HCI7 577 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 C1RLQ9NZP8 487 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 ZIM2Q9NZV7 527 aa14.05□□□□□ -0.16
CHCHD3-202ENST00000423635 IGHV3OR16-10A0A075B7F0 116 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 MDFIC2A0A1B0GVS7 189 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 C5orf49A4QMS7 147 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 CENPBD1B2RD01 187 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 RNF13O43567 381 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 IGHG1P01857 330 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 CRYBA1P05813 215 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 HOXB9P17482 250 aaPredicted RBP14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 RGS8P57771 180 aaPredicted RBP14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 KRTAP10-3P60369 221 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 STX3Q13277 289 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 MTX3Q5HYI7 312 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 C6orf10Q5SRN2 563 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 HHATQ5VTY9 493 aa14.04□□□□□ -0.16
CHCHD3-202ENST00000423635 REEP3Q6NUK4 255 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms