RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TAS2R41P59536 307 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 LMO4P61968 165 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 RPL18Q07020 188 aaKnown RBP13.79□□□□□ -0.2
COL18A1-205ENST00000423214 CYLC2Q14093 348 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-205ENST00000423214 MOGQ16653 247 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 AVPI1Q5T686 147 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 TSPYL5Q86VY4 417 aaPredicted RBP13.79□□□□□ -0.2
COL18A1-205ENST00000423214 OR1J1Q8NGS3 322 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 PFN4Q8NHR9 129 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 ASB10Q8WXI3 467 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 LRRC58Q96CX6 371 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 SAP30LQ9HAJ7 183 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 INIPQ9NRY2 104 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 NKIRAS2Q9NYR9 191 aa13.79□□□□□ -0.2
COL18A1-205ENST00000423214 TENM1Q9UKZ4 2725 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 CENPBD1B2RD01 187 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 MRASO14807 208 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 TRMUO75648 421 aaKnown RBP13.78□□□□□ -0.2
COL18A1-205ENST00000423214 OR7A10O76100 309 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 MPZL1O95297 269 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 MT-ND1P03886 318 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 NR2C1P13056 603 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 ACADSP16219 412 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 EPHA1P21709 976 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 MDH1P40925 334 aaKnown RBP13.78□□□□□ -0.2
COL18A1-205ENST00000423214 CD47Q08722 323 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 HIST3H3Q16695 136 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 VMACQ2NL98 169 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 ACSM5Q6NUN0 579 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 USP51Q70EK9 711 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 SGTBQ96EQ0 304 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 TIMD4Q96H15 378 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 PRSS27Q9BQR3 290 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 CCDC134Q9H6E4 229 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 MEPEQ9NQ76 525 aaPredicted RBP13.78□□□□□ -0.2
COL18A1-205ENST00000423214 ARMCX1Q9P291 453 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 SH3GLB1Q9Y371 365 aa13.78□□□□□ -0.2
COL18A1-205ENST00000423214 A0A0G2JMP0 313 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 A0A0X1KG70 313 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 GMNCA6NCL1 334 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 FXYD1O00168 92 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 MGRN1O60291 552 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 SLC2A10O95528 541 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 GCH1P30793 250 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 RBM34P42696 430 aaKnown RBP13.77□□□□□ -0.21
COL18A1-205ENST00000423214 CRYBB2P43320 205 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 ZNF81P51508 661 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 UGT2B15P54855 530 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 RUNX1T1Q06455 604 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 TSTQ16762 297 aaKnown RBP13.77□□□□□ -0.21
COL18A1-205ENST00000423214 HFEQ30201 348 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 PABPC1L2AQ5JQF8 200 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 C10orf128Q5T292 105 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 UNQ6126/PRO20091Q6UXV3 157 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 OR4M2Q8NGB6 313 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 TMEM255BQ8WV15 326 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 ELMOD3Q96FG2 381 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 ECSITQ9BQ95 431 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 POLR2J2Q9GZM3 115 aaKnown RBP13.77□□□□□ -0.21
COL18A1-205ENST00000423214 POLR2J3Q9H1A7 115 aaKnown RBP13.77□□□□□ -0.21
COL18A1-205ENST00000423214 MED4Q9NPJ6 270 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 EIF3KQ9UBQ5 218 aaKnown RBP13.77□□□□□ -0.21
COL18A1-205ENST00000423214 BAG5Q9UL15 447 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 PCDHB10Q9UN67 800 aa13.77□□□□□ -0.21
COL18A1-205ENST00000423214 LOC105371242A0A075B767 164 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 PLSCR5A0PG75 271 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 MMP7P09237 267 aaPredicted RBP13.76□□□□□ -0.21
COL18A1-205ENST00000423214 FUT1P19526 365 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 STOMP27105 288 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 CFPP27918 469 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 CDAP32320 146 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 AQP2P41181 271 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 MRPS34P82930 218 aaKnown RBP13.76□□□□□ -0.21
COL18A1-205ENST00000423214 TOP3AQ13472 1001 aaPredicted RBP13.76□□□□□ -0.21
COL18A1-205ENST00000423214 MAPRE2Q15555 327 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 ZNF718Q3SXZ3 478 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 FAM209AQ5JX71 171 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 SPATA46Q5T0L3 261 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 CCDC80Q76M96 950 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 NKAIN4Q8IVV8 208 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 POU5F2Q8N7G0 328 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 CPEB3Q8NE35 698 aaKnown RBP13.76□□□□□ -0.21
COL18A1-205ENST00000423214 C10orf82Q8WW14 230 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 TMEM239Q8WW34 195 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 GTF3AQ92664 365 aaKnown RBP13.76□□□□□ -0.21
COL18A1-205ENST00000423214 RAB1CQ92928 201 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 JMJD8Q96S16 334 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 SH3GL1Q99961 368 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 GAL3ST1Q99999 423 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 MRPL13Q9BYD1 178 aaKnown RBP13.76□□□□□ -0.21
COL18A1-205ENST00000423214 SIAEQ9HAT2 523 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 SMURF2Q9HAU4 748 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 G6PC2Q9NQR9 355 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 WIPI2Q9Y4P8 454 aa13.76□□□□□ -0.21
COL18A1-205ENST00000423214 ISPDA4D126 451 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 C5orf49A4QMS7 147 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 TRIM77I1YAP6 450 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 SHOX2O60902 331 aaPredicted RBP13.75□□□□□ -0.21
COL18A1-205ENST00000423214 OR5F1O95221 314 aa13.75□□□□□ -0.21
COL18A1-205ENST00000423214 IGF2P01344 180 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms