RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 MOSPD2Q8NHP6 518 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 PFN4Q8NHR9 129 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 SLC25A40Q8TBP6 338 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 ADAMTS16Q8TE57 1224 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 NSMAFQ92636 917 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 LRRC58Q96CX6 371 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 RAB39BQ96DA2 213 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 ZMYND19Q96E35 227 aaPredicted RBP6.86□□□□□ -1.31
VIM-202ENST00000421459 MARS2Q96GW9 593 aaKnown RBP6.86□□□□□ -1.31
VIM-202ENST00000421459 C1orf147Q96MC9 270 aaPredicted RBP6.86□□□□□ -1.31
VIM-202ENST00000421459 ZNF48Q96MX3 618 aaPredicted RBP6.86□□□□□ -1.31
VIM-202ENST00000421459 JMJD8Q96S16 334 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 ZNF607Q96SK3 696 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 GAL3ST1Q99999 423 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 PRSS27Q9BQR3 290 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 ZNF747Q9BV97 191 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 MRPL13Q9BYD1 178 aaKnown RBP6.86□□□□□ -1.31
VIM-202ENST00000421459 OR2J1Q9GZK6 312 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 POFUT1Q9H488 388 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 VIPAS39Q9H9C1 493 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 SAP30LQ9HAJ7 183 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 MSL2Q9HCI7 577 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 SLCO1B3Q9NPD5 702 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 MEPEQ9NQ76 525 aaPredicted RBP6.86□□□□□ -1.31
VIM-202ENST00000421459 NANSQ9NR45 359 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 NKIRAS2Q9NYR9 191 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 ZNF69Q9UC07 566 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 EGFL7Q9UHF1 273 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 LEF1Q9UJU2 399 aaPredicted RBP6.86□□□□□ -1.31
VIM-202ENST00000421459 TRIM33Q9UPN9 1127 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 UGT2A1Q9Y4X1 527 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 DYSFO75923 2080 aa6.86□□□□□ -1.31
VIM-202ENST00000421459 PRKDCP78527 4128 aaKnown RBP6.86□□□□□ -1.31
VIM-202ENST00000421459 IQCMA0A1B0GVH7 501 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 SLC22A23A1A5C7 686 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 J3QLI3 93 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 MGRN1O60291 552 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 SERPINB7O75635 380 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 SASH3O75995 380 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 FARS2O95363 451 aaKnown RBP6.85□□□□□ -1.31
VIM-202ENST00000421459 SNAP29O95721 258 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 IGHG1P01857 330 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 SCG5P05408 212 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 SBK2P0C263 348 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 ZNF32P17041 273 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 FUT4P22083 530 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 STOMP27105 288 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 LIMS1P48059 325 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 UGT2B15P54855 530 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 PCBP3P57721 371 aaKnown RBP6.85□□□□□ -1.31
VIM-202ENST00000421459 STX1BP61266 288 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 ERVK-25P63136 954 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 DEFA6Q01524 100 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 TEKQ02763 1124 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 HSF2Q03933 536 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 PLP2Q04941 152 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 RPL18Q07020 188 aaKnown RBP6.85□□□□□ -1.31
VIM-202ENST00000421459 SCGB2A2Q13296 93 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 SGCAQ16586 387 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 SLC36A2Q495M3 483 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 PRR31Q5SQ13 230 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 OTPQ5XKR4 325 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 RFPL4BQ6ZWI9 263 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 HDXQ7Z353 690 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 RETREG3Q86VR2 466 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 NKAIN4Q8IVV8 208 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 DEFB108BQ8NET1 73 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 NOXO1Q8NFA2 376 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 OR1J2Q8NGS2 313 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 ASB10Q8WXI3 467 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 HDAC2Q92769 488 aaKnown RBP6.85□□□□□ -1.31
VIM-202ENST00000421459 RAB1CQ92928 201 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 NABP1Q96AH0 204 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 TAMM41Q96BW9 452 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 THOC1Q96FV9 657 aaKnown RBP6.85□□□□□ -1.31
VIM-202ENST00000421459 POM121L2Q96KW2 1035 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 BCL2L14Q9BZR8 327 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 C20orf141Q9NUB4 165 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 DDX28Q9NUL7 540 aaKnown RBP6.85□□□□□ -1.31
VIM-202ENST00000421459 NKIRAS1Q9NYS0 192 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 GPR160Q9UJ42 338 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 ZNF229Q9UJW7 825 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 FBXL3Q9UKT7 428 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 ANGPT4Q9Y264 503 aa6.85□□□□□ -1.31
VIM-202ENST00000421459 TRAPPC13A5PLN9 417 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 DNAJC9-AS1A6NH13 148 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 EVPLLA8MZ36 301 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 MCIDASD6RGH6 385 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 POLR3GO15318 223 aaPredicted RBP6.84□□□□□ -1.31
VIM-202ENST00000421459 PIP5K1CO60331 668 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 FMO6PO60774 539 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 PTHP01270 115 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 HIST1H2ABP04908 130 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 HKR1P10072 659 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 ACADSP16219 412 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 PPIBP23284 216 aaKnown RBP6.84□□□□□ -1.31
VIM-202ENST00000421459 FPR2P25090 351 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 GCH1P30793 250 aa6.84□□□□□ -1.31
VIM-202ENST00000421459 MRPL19P49406 292 aaKnown RBP6.84□□□□□ -1.31
VIM-202ENST00000421459 ZNF84P51523 738 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms