RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 LIPHQ8WWY8 451 aa9.85□□□□□ -0.83
DDX56-203ENST00000421223 S100A16Q96FQ6 103 aaKnown RBP9.85□□□□□ -0.83
DDX56-203ENST00000421223 UBL7Q96S82 380 aaPredicted RBP9.85□□□□□ -0.83
DDX56-203ENST00000421223 ABHD6Q9BV23 337 aa9.85□□□□□ -0.83
DDX56-203ENST00000421223 MED28Q9H204 178 aa9.85□□□□□ -0.83
DDX56-203ENST00000421223 PRO3102Q9H379 93 aa9.85□□□□□ -0.83
DDX56-203ENST00000421223 DPAGT1Q9H3H5 408 aa9.85□□□□□ -0.83
DDX56-203ENST00000421223 MRPL22Q9NWU5 206 aaKnown RBP9.85□□□□□ -0.83
DDX56-203ENST00000421223 ANKRD10Q9NXR5 420 aa9.85□□□□□ -0.83
DDX56-203ENST00000421223 FLVCR2Q9UPI3 526 aa9.85□□□□□ -0.83
DDX56-203ENST00000421223 A0A0A6YYJ9 748 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 DCDC2BA2VCK2 349 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 OR4C45A6NMZ5 311 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 ZFAND5O76080 213 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 DHFRP00374 187 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 MT-ATP6P00846 226 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 CAMK2DQ13557 499 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 SLC36A2Q495M3 483 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 TRIM61Q5EBN2 209 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 YOD1Q5VVQ6 348 aaPredicted RBP9.84□□□□□ -0.83
DDX56-203ENST00000421223 NDUFAF7Q7L592 441 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 KCTD20Q7Z5Y7 419 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.84□□□□□ -0.83
DDX56-203ENST00000421223 GLB1L2Q8IW92 636 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 WDFY1Q8IWB7 410 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 CARFQ8N187 725 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 RNF166Q96A37 237 aaPredicted RBP9.84□□□□□ -0.83
DDX56-203ENST00000421223 OR5B2Q96R09 309 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 OR5V1Q9UGF6 321 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 GPN3Q9UHW5 284 aaPredicted RBP9.84□□□□□ -0.83
DDX56-203ENST00000421223 POLR1DQ9Y2S0 133 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 EMC9Q9Y3B6 208 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 PTRH2Q9Y3E5 179 aaKnown RBP9.84□□□□□ -0.83
DDX56-203ENST00000421223 PHF3Q92576 2039 aaKnown RBP9.84□□□□□ -0.83
DDX56-203ENST00000421223 LY6G6EA0A0G2JKS1 128 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 AIPO00170 330 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 TXNDC12O95881 172 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 TCRBP04435 133 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 SLC6A1P30531 599 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 BIDP55957 195 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 GLO1Q04760 184 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 MFGE8Q08431 387 aaPredicted RBP9.84□□□□□ -0.83
DDX56-203ENST00000421223 EFR3AQ14156 821 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 FCN2Q15485 313 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 ZNF684Q5T5D7 378 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 PMS2CLQ68D20 193 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 BMPERQ8N8U9 685 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 NFAM1Q8NET5 270 aaPredicted RBP9.84□□□□□ -0.83
DDX56-203ENST00000421223 MARVELD1Q9BSK0 173 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 ING3Q9NXR8 418 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 MYOTQ9UBF9 498 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 FBXL2Q9UKC9 423 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 PILRBQ9UKJ0 227 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 U3KQA8 63 aa9.84□□□□□ -0.83
DDX56-203ENST00000421223 IGKV1D-43A0A0B4J1Z2 117 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 CDK2P24941 298 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 KIR3DL2P43630 455 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 SLC17A1Q14916 467 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 Q5BKY6 102 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 DMRTC1Q5HYR2 192 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 UBE2NLQ5JXB2 153 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 UNQ9370/PRO34162Q6UXP9 181 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 DCXRQ7Z4W1 244 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 LUZP2Q86TE4 346 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 OR5L2Q8NGL0 311 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 NKD1Q969G9 470 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 SPSB2Q99619 263 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 OR10A4Q9H209 315 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 CAMK2AQ9UQM7 478 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 A0A1W2PPL8 197 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 SSNA1O43805 119 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 ABHD16AO95870 558 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 RIDAP52758 137 aaKnown RBP9.83□□□□□ -0.84
DDX56-203ENST00000421223 ART1P52961 327 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 RRAS2P62070 204 aaPredicted RBP9.83□□□□□ -0.84
DDX56-203ENST00000421223 TMEM225Q6GV28 225 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 H1FNTQ75WM6 255 aaPredicted RBP9.83□□□□□ -0.84
DDX56-203ENST00000421223 OR4K17Q8NGC6 315 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 ADAMTS14Q8WXS8 1223 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 AKAP1Q92667 903 aaKnown RBP eCLIP9.83□□□□□ -0.84
DDX56-203ENST00000421223 ZNF775Q96BV0 537 aaPredicted RBP9.83□□□□□ -0.84
DDX56-203ENST00000421223 SLC25A38Q96DW6 304 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 DCBLD2Q96PD2 775 aa9.83□□□□□ -0.84
DDX56-203ENST00000421223 WDR77Q9BQA1 342 aaPredicted RBP9.83□□□□□ -0.84
DDX56-203ENST00000421223 PCDHGA9Q9Y5G4 932 aaKnown RBP9.83□□□□□ -0.84
DDX56-203ENST00000421223 TMEM200CA6NKL6 621 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 MS4A18H0YCH9 400 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 AKR7A2O43488 359 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 GMDSO60547 372 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 DXOO77932 396 aaKnown RBP9.82□□□□□ -0.84
DDX56-203ENST00000421223 KLK3P07288 261 aaPredicted RBP9.82□□□□□ -0.84
DDX56-203ENST00000421223 YES1P07947 543 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 MAPK3P27361 379 aaPredicted RBP9.82□□□□□ -0.84
DDX56-203ENST00000421223 CLDN6P56747 220 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 HSF1Q00613 529 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 SPOCK1Q08629 439 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 GFOD2Q3B7J2 385 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 MS4A18Q3C1V0 323 aa9.82□□□□□ -0.84
DDX56-203ENST00000421223 TMEM176BQ3YBM2 270 aaPredicted RBP9.82□□□□□ -0.84
DDX56-203ENST00000421223 FAM209AQ5JX71 171 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms