RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 OR10G3Q8NGC4 313 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 THAP3Q8WTV1 239 aaPredicted RBP13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 MR1Q95460 341 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 IMMP1LQ96LU5 166 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ULBP3Q9BZM4 244 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 NIPAL2Q9H841 368 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 NEK6Q9HC98 313 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ING3Q9NXR8 418 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 STEAP1Q9UHE8 339 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 VDAC3Q9Y277 283 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 IGHG1P01857 330 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 TFPIP10646 304 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 COX6A1P12074 109 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 IFNGR1P15260 489 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ACHEP22303 614 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 FOLR3P41439 243 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ART1P52961 327 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SSBP1Q04837 148 aaKnown RBP13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 GPR176Q14439 515 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 KCNJ8Q15842 424 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 TBRG1Q3YBR2 411 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 WDR38Q5JTN6 314 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 TMEM244Q5VVB8 128 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ARSKQ6UWY0 536 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 DBX2Q6ZNG2 339 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 UEVLDQ8IX04 471 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 GTPBP8Q8N3Z3 284 aaPredicted RBP13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 NKAIN3Q8N8D7 197 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 OR5H6Q8NGV6 325 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 TSEN15Q8WW01 171 aaKnown RBP13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 HSD17B8Q92506 261 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 UPRTQ96BW1 309 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ST6GAL2Q96JF0 529 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ARL5BQ96KC2 179 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ABHD6Q9BV23 337 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SLCO1C1Q9NYB5 712 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 NLKQ9UBE8 527 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 CDV3Q9UKY7 258 aaKnown RBP13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PCDHGA5Q9Y5G8 931 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 CHCHD2Q9Y6H1 151 aaPredicted RBP13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 R4GMQ9 66 aa13.05□□□□□ -0.32
HLA-DPA1-242ENST00000419277 C7orf66A4D0T2 115 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ACOT7O00154 380 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 DNPH1O43598 174 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 VAMP5O95183 116 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 YES1P07947 543 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ARSBP15848 533 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 MMP16P51512 607 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SLC35A1P78382 337 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 DBPQ10586 325 aaPredicted RBP13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 MYBPHQ13203 477 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 EIF2B1Q14232 305 aaKnown RBP13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 NDUFA5Q16718 116 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 LRRTM1Q86UE6 522 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 CATSPERDQ86XM0 798 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PLCZ1Q86YW0 608 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 LIX1LQ8IVB5 337 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PRSS35Q8N3Z0 413 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ZNF433Q8N7K0 673 aaPredicted RBP13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 OR10H5Q8NGA6 315 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SGCZQ96LD1 299 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 TAS2R8Q9NYW2 309 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 HHLA2Q9UM44 414 aa13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 RBMX2Q9Y388 322 aaKnown RBP13.04□□□□□ -0.32
HLA-DPA1-242ENST00000419277 A0A0A6YYH2 397 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 A0A1W2PPK0 400 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 FAM172BPA6NC97 362 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 A6NJ64 397 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 C17orf51A8MQB3 221 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PSMD9O00233 223 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 RGS13O14921 159 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 TLX3O43711 291 aaPredicted RBP13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 EIF1BO60739 113 aaKnown RBP13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 KLF7O75840 302 aaPredicted RBP13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PMS2P2O95744 297 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SSR4P51571 173 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 RRAS2P62070 204 aaPredicted RBP13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 RIPPLY1Q0D2K3 151 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SLC36A2Q495M3 483 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ELFN2Q5R3F8 820 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 TMEM69Q5SWH9 247 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 GLT8D1Q68CQ7 371 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 NDUFAF7Q7L592 441 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 KRT74Q7RTS7 529 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 CMTM4Q8IZR5 234 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 NOXO1Q8NFA2 376 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 OR6X1Q8NH79 312 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PAQR8Q8TEZ7 354 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 RNF133Q8WVZ7 376 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 AKAP1Q92667 903 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 NTNG2Q96CW9 530 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 SLC25A44Q96H78 314 aaPredicted RBP13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 ANGPTL4Q9BY76 406 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 MRPL13Q9BYD1 178 aaKnown RBP13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 STRADBQ9C0K7 418 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PTTG3PQ9NZH4 202 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 DHDHQ9UQ10 334 aa13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 PTRH2Q9Y3E5 179 aaKnown RBP13.03□□□□□ -0.32
HLA-DPA1-242ENST00000419277 LRP12Q9Y561 859 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms