RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 INTS1Q8N201 2190 aaKnown RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 IGKV3D-15A0A087WSY6 115 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 LOC100506127A0A0U1RQW1 187 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 PNMA8CA0A1B0GUJ8 204 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 A0A1W2PQL4 384 aaPredicted RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TMEM8BA6NDV4 472 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TVP23AA6NH52 213 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 OR6C65A6NJZ3 312 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SLC22A20A6NK97 555 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF716A6NP11 495 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 FAM171A2A8MVW0 826 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 J3QRE1 110 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 AQP7O14520 342 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 RAMP1O60894 148 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TMCC2O75069 709 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 IGHG3P01860 377 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 HRGP04196 525 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ITGB2P05107 769 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ADRA2AP08913 450 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TACSTD2P09758 323 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 GAAP10253 952 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 CPEP16870 476 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 KLK2P20151 261 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 GADD45AP24522 165 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 GABRA5P31644 462 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 LIPAP38571 399 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 GUCA1AP43080 201 aaPredicted RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SERPINB10P48595 397 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 CD97P48960 835 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 STARP49675 285 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 RGS6P49758 472 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 GBX2P52951 348 aaPredicted RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 CXADRP78310 365 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF85Q03923 595 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SRYQ05066 204 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 EGR3Q06889 387 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ACSM1Q08AH1 577 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 RASGEF1BQ0VAM2 473 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SLC17A1Q14916 467 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TRAM1Q15629 374 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 C3AR1Q16581 482 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 CDONQ4KMG0 1287 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TP53I3Q53FA7 332 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF362Q5T0B9 420 aaPredicted RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 C10orf128Q5T292 105 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 OR2G6Q5TZ20 316 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 LIPKQ5VXJ0 399 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SLC18B1Q6NT16 456 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 KCTD18Q6PI47 426 aaPredicted RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 UNQ6494/PRO21346Q6UXR6 183 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 B3GLCTQ6Y288 498 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 Q6ZS92 163 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SLC16A12Q6ZSM3 486 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 USP43Q70EL4 1123 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 AAED1Q7RTV5 226 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 LHFPL3Q86UP9 236 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 CDC20BQ86Y33 519 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 KLBQ86Z14 1044 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TIGD4Q8IY51 512 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TMEM123Q8N131 208 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 OR6V1Q8N148 313 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 RFLNBQ8N5W9 214 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 YIPF7Q8N8F6 280 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SLC26A10Q8NG04 563 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 OR52N5Q8NH56 324 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SPRYD4Q8WW59 207 aaPredicted RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 NSMAFQ92636 917 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 THRSPQ92748 146 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 PTP4A1Q93096 173 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 C12orf43Q96C57 262 aaKnown RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 INTS12Q96CB8 462 aaKnown RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 NMD3Q96D46 503 aaKnown RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF845Q96IR2 970 aaPredicted RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TSSK2Q96PF2 358 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ALKBH3Q96Q83 286 aaPredicted RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 OR2M2Q96R28 347 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 DDOQ99489 341 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TSC22D3Q99576 134 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 COQ7Q99807 217 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 DCUN1D5Q9BTE7 237 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 EMC6Q9BV81 110 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 TSPAN10Q9H1Z9 355 aaPredicted RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 MARCH7Q9H992 704 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SRA1Q9HD15 236 aaKnown RBP5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ACOXLQ9NUZ1 547 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 GLTPQ9NZD2 209 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 SPRR3Q9UBC9 169 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 B3GNT3Q9Y2A9 372 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 RAXQ9Y2V3 346 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 FLVCR1Q9Y5Y0 555 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 FREM1Q5H8C1 2179 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 ALPK2Q86TB3 2170 aa5.3□□□□□ -1.56
HMGB3-202ENST00000419110 OR14I1A6ND48 311 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF878C9JN71 531 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF587BE7ETH6 402 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 H0YC42 278 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 H3BSA7 217 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 J3QLW9 94 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 DCTN6O00399 190 aa5.29□□□□□ -1.56
HMGB3-202ENST00000419110 GPRIN2O60269 458 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms