RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 UBL3O95164 117 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 IGFBP1P08833 259 aaPredicted RBP16.21■□□□□ 0.19
PTCD3-204ENST00000418628 MMP7P09237 267 aaPredicted RBP16.21■□□□□ 0.19
PTCD3-204ENST00000418628 FCGR1AP12314 374 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 HIST1H1CP16403 213 aaKnown RBP16.21■□□□□ 0.19
PTCD3-204ENST00000418628 NPR2P20594 1047 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 KPNB1Q14974 876 aaKnown RBP16.21■□□□□ 0.19
PTCD3-204ENST00000418628 GSG1Q2KHT4 349 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 ZNF362Q5T0B9 420 aaPredicted RBP16.21■□□□□ 0.19
PTCD3-204ENST00000418628 FAHD1Q6P587 224 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 B3GLCTQ6Y288 498 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 DPPA2Q7Z7J5 298 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 ZNF584Q8IVC4 421 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 ZNF611Q8N823 705 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 OR52L1Q8NGH7 329 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 NEUROG1Q92886 237 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 MBD6Q96DN6 1003 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 IFT27Q9BW83 186 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 SYT4Q9H2B2 425 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 SIAEQ9HAT2 523 aa16.21■□□□□ 0.19
PTCD3-204ENST00000418628 H3BNX3 289 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 DCTN6O00399 190 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 E2F6O75461 281 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 SOX14O95416 240 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 RAF1P04049 648 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 DANCRP0C864 163 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 CD53P19397 219 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 FASP25445 335 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 CDAP32320 146 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 NAAAQ02083 359 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 ETFDHQ16134 617 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 FAM27BQ5VT28 67 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 OR4Q3Q8NH05 313 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 OR5K1Q8NHB7 308 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 NSMAFQ92636 917 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 AKAP1Q92667 903 aaKnown RBP eCLIP16.2■□□□□ 0.18
PTCD3-204ENST00000418628 SH3GL3Q99963 347 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 GABARAPL1Q9H0R8 117 aa16.2■□□□□ 0.18
PTCD3-204ENST00000418628 IGLV1-36A0A0B4J1U3 117 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 FARS2O95363 451 aaKnown RBP16.19■□□□□ 0.18
PTCD3-204ENST00000418628 ANXA8P13928 327 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 CALCRP30988 508 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 IDH3GP51553 393 aaPredicted RBP16.19■□□□□ 0.18
PTCD3-204ENST00000418628 GABPB1Q06547 395 aaPredicted RBP16.19■□□□□ 0.18
PTCD3-204ENST00000418628 CLEC12AQ5QGZ9 265 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 ZBTB46Q86UZ6 589 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 NPEPL1Q8NDH3 523 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 DNAJC9Q8WXX5 260 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 LRTOMTQ8WZ04 291 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 FBXW5Q969U6 566 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 NUAK2Q9H093 628 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 RACGAP1Q9H0H5 632 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 UBTD1Q9HAC8 227 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 POLE4Q9NR33 117 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 TBC1D23Q9NUY8 699 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 FBXL3Q9UKT7 428 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 BAIAP2Q9UQB8 552 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 PLEKHA6Q9Y2H5 1048 aa16.19■□□□□ 0.18
PTCD3-204ENST00000418628 MAP1AP78559 2803 aaPredicted RBP16.18■□□□□ 0.18
PTCD3-204ENST00000418628 MED13LQ71F56 2210 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 CELSR1Q9NYQ6 3014 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 IGHV2OR16-5A0A0B4J2B6 119 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 ATP6V1G2-DDX39BF2Z307 99 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 SCG5P05408 212 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 PATE4P0C8F1 98 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 GAAP10253 952 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 PRKACGP22612 351 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 CAPZA2P47755 286 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 GIPRP48546 466 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 CDH11P55287 796 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 RAB1AP62820 205 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 ENDOGQ14249 297 aaKnown RBP16.18■□□□□ 0.18
PTCD3-204ENST00000418628 PGGHGQ32M88 737 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 SLC36A3Q495N2 470 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 PARP8Q8N3A8 854 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 OR4K13Q8NH42 304 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 PYDC1Q8WXC3 89 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 NMNAT3Q96T66 252 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 BDH2Q9BUT1 245 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 TSSK6Q9BXA6 273 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 VPS13CQ709C8 3753 aa16.18■□□□□ 0.18
PTCD3-204ENST00000418628 ZNF469Q96JG9 3925 aaPredicted RBP16.17■□□□□ 0.18
PTCD3-204ENST00000418628 OR6C68A6NDL8 312 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 E7EQL1 145 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 CST2P09228 141 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 CD79AP11912 226 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 MSR1P21757 451 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 PTDSS1P48651 473 aaKnown RBP16.17■□□□□ 0.18
PTCD3-204ENST00000418628 DAPP51397 102 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 PIGFQ07326 219 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTCD3-204ENST00000418628 TESK1Q15569 626 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 KCNMB1Q16558 191 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 SLC36A2Q495M3 483 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 ZFP1Q6P2D0 407 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 LEG1Q6P5S2 330 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 SLC16A14Q7RTX9 510 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 DTX2Q86UW9 622 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 SDR9C7Q8NEX9 313 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 OR2T33Q8NG76 320 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms