RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PLA2G12AQ9BZM1 189 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 SYT4Q9H2B2 425 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 RNF121Q9H920 327 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 UGT2A1Q9Y4X1 527 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 IGHV1-18A0A0C4DH31 117 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 A0A1W2PPL8 197 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 BHLHE40O14503 412 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 HS3ST1O14792 307 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 SOX14O95416 240 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 IGLV1-44P01699 117 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 CRYAAP02489 173 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 CDAP32320 146 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 ZNF672Q499Z4 452 aaPredicted RBP20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 SLC35F1Q5T1Q4 408 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 FAM27BQ5VT28 67 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 LEG1Q6P5S2 330 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 C20orf204Q6ZNR8 217 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 PTCHD4Q6ZW05 846 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 AMIGO2Q86SJ2 522 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 CDH24Q86UP0 819 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 SVOPLQ8N434 492 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 LNX2Q8N448 690 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 NMNAT3Q96T66 252 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 RERGLQ9H628 205 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 POU2F3Q9UKI9 436 aa20.11■□□□□ 0.81
SMARCB1-205ENST00000417137 TEP1Q99973 2627 aaKnown RBP20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 OSMP13725 252 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 ZNF23P17027 643 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 DNASE1P24855 282 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 GIPRP48546 466 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 PTDSS1P48651 473 aaKnown RBP20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 IDH3GP51553 393 aaPredicted RBP20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 NPRL3Q12980 569 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 KEAP1Q14145 624 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 ZSCAN26Q16670 478 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 SLC36A3Q495N2 470 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 FOXL2NBQ6ZUU3 175 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 LRRC18Q8N456 261 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 OR52E2Q8NGJ4 325 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 OR8D4Q8NGM9 314 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 NRGNQ92686 78 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 NINJ1Q92982 152 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 NUAK2Q9H093 628 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 CCNB1IP1Q9NPC3 277 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 ZNF224Q9NZL3 707 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 REV1Q9UBZ9 1251 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 ST6GALNAC2Q9UJ37 374 aa20.1■□□□□ 0.81
SMARCB1-205ENST00000417137 ZNF503-AS2A6NEH8 195 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 SHISA9B4DS77 424 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 PTHP01270 115 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 RAF1P04049 648 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 TP53P04637 393 aaPredicted RBP20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 IGFBP1P08833 259 aaPredicted RBP20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 CECR9P0C854 216 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 CTLA4P16410 223 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 MSR1P21757 451 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 POU1F1P28069 291 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 LAP3P28838 519 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 PCBD1P61457 104 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 PLP2Q04941 152 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 PAMR1Q6UXH9 720 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 GLB1L2Q8IW92 636 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 ZNF611Q8N823 705 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 KBTBD8Q8NFY9 601 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 FBXW5Q969U6 566 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 NABP1Q96AH0 204 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 WACQ9BTA9 647 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 TEX12Q9BXU0 123 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 LIME1Q9H400 295 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 CISD1Q9NZ45 108 aaKnown RBP20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 KLHL21Q9UJP4 597 aa20.09■□□□□ 0.81
SMARCB1-205ENST00000417137 ABCA4P78363 2273 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 IFNGP01579 166 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 CST2P09228 141 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 PATE4P0C8F1 98 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 CDH11P55287 796 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 NAAAQ02083 359 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 ETFDHQ16134 617 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 FAHD1Q6P587 224 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 LILRB1Q8NHL6 650 aaPredicted RBP20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 HTRA1Q92743 480 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 SEMA6AQ9H2E6 1030 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 SRA1Q9HD15 236 aaKnown RBP20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 POLE4Q9NR33 117 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 PAPOLBQ9NRJ5 636 aaKnown RBP20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 MOKQ9UQ07 419 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 COA3Q9Y2R0 106 aaPredicted RBP20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 ATP23Q9Y6H3 246 aa20.08■□□□□ 0.81
SMARCB1-205ENST00000417137 C12orf71A8MTZ7 269 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 SERPINA5P05154 406 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 CENPAP49450 140 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 SLC27A4Q6P1M0 643 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 NPEPL1Q8NDH3 523 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 SDR9C7Q8NEX9 313 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 OR4F15Q8NGB8 312 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 FGFBP3Q8TAT2 258 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 C1orf198Q9H425 327 aa20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 RPRD1BQ9NQG5 326 aaKnown RBP20.07■□□□□ 0.8
SMARCB1-205ENST00000417137 FAIMQ9NVQ4 179 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms