RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 FTCDNL1E5RQL4 147 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 NPIPB7O75200 414 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 ZNF432O94892 652 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 HPXP02790 462 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 EGR1P18146 543 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 CBLP22681 906 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 ARHGDIAP52565 204 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 EGR4Q05215 589 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 SNTB2Q13425 540 aaKnown RBP11.1□□□□□ -0.63
LINC00339-202ENST00000416769 ELFN2Q5R3F8 820 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 WDR88Q6ZMY6 472 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 AMIGO2Q86SJ2 522 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 LRP11Q86VZ4 500 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 NUP37Q8NFH4 326 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 OR4C15Q8NGM1 316 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 OR6S1Q8NH40 331 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 OR52J3Q8NH60 311 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 CLDND2Q8NHS1 167 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 SLC7A13Q8TCU3 470 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 UBASH3BQ8TF42 649 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 TMEM255BQ8WV15 326 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 KTI12Q96EK9 354 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-202ENST00000416769 NRBF2Q96F24 287 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 CENPNQ96H22 339 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-202ENST00000416769 PKP2Q99959 881 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 MRPL37Q9BZE1 423 aaKnown RBP11.1□□□□□ -0.63
LINC00339-202ENST00000416769 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 NTN4Q9HB63 628 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 FZR1Q9UM11 496 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 MED31Q9Y3C7 131 aa11.1□□□□□ -0.63
LINC00339-202ENST00000416769 SAMHD1Q9Y3Z3 626 aaKnown RBP11.1□□□□□ -0.63
LINC00339-202ENST00000416769 IGKV1D-42A0A075B6H8 117 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 TRBV4-1A0A0J9YWV2 114 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-202ENST00000416769 OR2T1O43869 369 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 MGRN1O60291 552 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 NCR1O76036 304 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 AVPP01185 164 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 HLA-HP01893 362 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 CBR1P16152 277 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 COL8A2P25067 703 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 ALDH3B1P43353 468 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 RPS5P46782 204 aaKnown RBP11.09□□□□□ -0.63
LINC00339-202ENST00000416769 PRKCDQ05655 676 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 HNRNPA0Q13151 305 aaKnown RBP11.09□□□□□ -0.63
LINC00339-202ENST00000416769 RIPK1Q13546 671 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 MICAQ29983 383 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 CEACAM16Q2WEN9 425 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 CARD17Q5XLA6 110 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 TBPL2Q6SJ96 375 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 ZNF730Q6ZMV8 503 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-202ENST00000416769 MBOAT2Q6ZWT7 520 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 PQLC1Q8N2U9 271 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 OR5K1Q8NHB7 308 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 YIPF5Q969M3 257 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 SYT3Q9BQG1 590 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 TAPBPLQ9BX59 468 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 CRLF2Q9HC73 371 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 GPR35Q9HC97 309 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 MEPEQ9NQ76 525 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-202ENST00000416769 VNN3Q9NY84 501 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 TREM2Q9NZC2 230 aa11.09□□□□□ -0.63
LINC00339-202ENST00000416769 TRAV36DV7A0A075B6V5 113 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 CCNB2O95067 398 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 BAG2O95816 211 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 HPRP00739 348 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 HLA-DOBP13765 273 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 ANPEPP15144 967 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 IFNGR2P38484 337 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 CAPZA2P47755 286 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 DVL1P1P54792 670 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-202ENST00000416769 UGT2B15P54855 530 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 PPP1R8Q12972 351 aaKnown RBP11.08□□□□□ -0.64
LINC00339-202ENST00000416769 SEC23BQ15437 767 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 ABHD12BQ7Z5M8 362 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-202ENST00000416769 TMEM179BQ7Z7N9 219 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF540Q8NDQ6 660 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 OR4F15Q8NGB8 312 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 OR4K5Q8NGD3 323 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 MFSD8Q8NHS3 518 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 MAGEE2Q8TD90 523 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-202ENST00000416769 GIPC3Q8TF64 312 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-202ENST00000416769 HPS1Q92902 700 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 TAAR8Q969N4 342 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 LINC00470Q9BZP3 86 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 HIF1ANQ9NWT6 349 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 STX18Q9P2W9 335 aaKnown RBP11.08□□□□□ -0.64
LINC00339-202ENST00000416769 U3KQV3 271 aa11.08□□□□□ -0.64
LINC00339-202ENST00000416769 ARRDC5A6NEK1 342 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 M0R082 166 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 M0R3G1 203 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 TRAF3IP2O43734 574 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-202ENST00000416769 OR10H3O60404 316 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 FZD7O75084 574 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 E2F6O75461 281 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 AHSA1O95433 338 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 PIGFQ07326 219 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms