RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 H0YC42 278 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 LYRM1O43325 122 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 EIF1BO60739 113 aaKnown RBP12.96□□□□□ -0.33
SGCE-202ENST00000415788 FZD7O75084 574 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 FAM157BP0CG42 384 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 PSKH1P11801 424 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 CFL1P23528 166 aaKnown RBP12.96□□□□□ -0.33
SGCE-202ENST00000415788 IFNGR2P38484 337 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 WNT4P56705 351 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 SLC35A1P78382 337 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 IKZF1Q13422 519 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 C3AR1Q16581 482 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 C22orf42Q6IC83 251 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 ZNF585AQ6P3V2 769 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 PODNL1Q6PEZ8 512 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 ADGRE4PQ86SQ3 457 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 CDK20Q8IZL9 346 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 Q8N402 240 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 UCN2Q96RP3 112 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 FUZQ9BT04 418 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 PTDSS2Q9BVG9 487 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 PPP1R3EQ9H7J1 279 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.33
SGCE-202ENST00000415788 MCTS1Q9ULC4 181 aaKnown RBP12.96□□□□□ -0.33
SGCE-202ENST00000415788 ZNF175Q9Y473 711 aa12.96□□□□□ -0.33
SGCE-202ENST00000415788 TRBV4-1A0A0J9YWV2 114 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 SNTNA6NMZ2 147 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 CXCL13O43927 109 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 TGM4P49221 684 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 CTBP2P56545 445 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 BTG1P62324 171 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 COX10Q12887 443 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 FOXD4Q12950 439 aaPredicted RBP12.95□□□□□ -0.34
SGCE-202ENST00000415788 ACSF3Q4G176 576 aaPredicted RBP12.95□□□□□ -0.34
SGCE-202ENST00000415788 EMC4Q5J8M3 183 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 C1QL3Q5VWW1 255 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 MZT2AQ6P582 158 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 PAMR1Q6UXH9 720 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 DOLPP1Q86YN1 238 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 OR4K5Q8NGD3 323 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 OR52I1Q8NGK6 324 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 AKAP1Q92667 903 aaKnown RBP eCLIP12.95□□□□□ -0.34
SGCE-202ENST00000415788 KATNB1Q9BVA0 655 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 CALHM2Q9HA72 323 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 MEPEQ9NQ76 525 aaPredicted RBP12.95□□□□□ -0.34
SGCE-202ENST00000415788 ALKBH4Q9NXW9 302 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 NUP50Q9UKX7 468 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 TMEM5Q9Y2B1 443 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 ZNF407Q9C0G0 2248 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 CD8B2A6NJW9 211 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 FTCDNL1E5RQL4 147 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 H3BN98 237 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 ZNHIT1O43257 154 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 SYNGR4O95473 234 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 FCGR2AP12318 317 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 GABRA5P31644 462 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 OR7A5Q15622 319 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 ZNF239Q16600 458 aaKnown RBP12.95□□□□□ -0.34
SGCE-202ENST00000415788 CD300LDQ6UXZ3 194 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 NRMQ8IXM6 262 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 TCEANCQ8N8B7 351 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 PIGXQ8TBF5 258 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 UFD1Q92890 307 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 TAAR8Q969N4 342 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 CREB3L1Q96BA8 519 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 SGTBQ96EQ0 304 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 FKRPQ9H9S5 495 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 FGF20Q9NP95 211 aaPredicted RBP12.95□□□□□ -0.34
SGCE-202ENST00000415788 PTTG3PQ9NZH4 202 aa12.95□□□□□ -0.34
SGCE-202ENST00000415788 SF3B6Q9Y3B4 125 aaKnown RBP12.95□□□□□ -0.34
SGCE-202ENST00000415788 BOD1L1Q8NFC6 3051 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 LINC00862A6NCI5 91 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 OR10H3O60404 316 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 BGLAPP02818 100 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 ARSBP15848 533 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 ENPP1P22413 925 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 CA7P43166 264 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 INPP1P49441 399 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 AGFG1P52594 562 aaKnown RBP12.94□□□□□ -0.34
SGCE-202ENST00000415788 SEC23BQ15437 767 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 ZNF74Q16587 644 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 C1orf185Q5T7R7 199 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 NSUN5P2Q63ZY6 315 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 LAMTOR1Q6IAA8 161 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 CNIH2Q6PI25 160 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 CD200R1LQ6Q8B3 271 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 PAQR6Q6TCH4 344 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 MAMDC2Q7Z304 686 aaPredicted RBP12.94□□□□□ -0.34
SGCE-202ENST00000415788 HDDC2Q7Z4H3 204 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 C10orf53Q8N6V4 93 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 OR4M1Q8NGD0 313 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 PFN4Q8NHR9 129 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 LIPHQ8WWY8 451 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 RELTQ969Z4 430 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 BPIFA2Q96DR5 249 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 ZNF845Q96IR2 970 aaPredicted RBP12.94□□□□□ -0.34
SGCE-202ENST00000415788 KCNJ15Q99712 375 aa12.94□□□□□ -0.34
SGCE-202ENST00000415788 NAA11Q9BSU3 229 aaPredicted RBP12.94□□□□□ -0.34
SGCE-202ENST00000415788 SRXN1Q9BYN0 137 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms