RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ZBTB8BQ8NAP8 495 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-205ENST00000414879 FCRL1Q96LA6 429 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 RTL8AQ9BWD3 113 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 BEX2Q9BXY8 128 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 OR51J1Q9H342 316 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 BEX1Q9HBH7 125 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 HINT3Q9NQE9 182 aaKnown RBP10.9□□□□□ -0.66
PTPRF-205ENST00000414879 PROCRQ9UNN8 238 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 SIP14410 1827 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 A0A0B4J2E0 115 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 A0A1B0GX12 115 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 HMX3A6NHT5 357 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 ZSCAN5BA6NJL1 495 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 H7C1C5 153 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 SOD1P00441 154 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 SRMP19623 302 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 GALP22466 123 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 TAS2R20P59543 309 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 LCN6P62502 163 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 GLYR1Q49A26 553 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF321PQ8N8H1 164 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 LIPHQ8WWY8 451 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 SLC25A21Q9BQT8 299 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-205ENST00000414879 NDUFB11Q9NX14 153 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 IL20Q9NYY1 176 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 NPAP1Q9NZP6 1156 aa10.9□□□□□ -0.66
PTPRF-205ENST00000414879 GREM1O60565 184 aa10.9□□□□□ -0.67
PTPRF-205ENST00000414879 SERPINA2P20848 420 aa10.9□□□□□ -0.67
PTPRF-205ENST00000414879 EXOSC6Q5RKV6 272 aaKnown RBP10.9□□□□□ -0.67
PTPRF-205ENST00000414879 ANKRD37Q7Z713 158 aa10.9□□□□□ -0.67
PTPRF-205ENST00000414879 NAXDQ8IW45 347 aa10.9□□□□□ -0.67
PTPRF-205ENST00000414879 UPRTQ96BW1 309 aa10.9□□□□□ -0.67
PTPRF-205ENST00000414879 PBDC1Q9BVG4 233 aa10.9□□□□□ -0.67
PTPRF-205ENST00000414879 TSPAN10Q9H1Z9 355 aaPredicted RBP10.9□□□□□ -0.67
PTPRF-205ENST00000414879 WDR54Q9H977 334 aa10.9□□□□□ -0.67
PTPRF-205ENST00000414879 C12orf4Q9NQ89 552 aa10.9□□□□□ -0.67
PTPRF-205ENST00000414879 OR6C6A6NF89 314 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 G3V3Y1 287 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 DVL2O14641 736 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 IFNA2P01563 188 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 QDPRP09417 244 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 GABRR1P24046 479 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 AQP6Q13520 282 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 RNPS1Q15287 305 aaKnown RBP10.89□□□□□ -0.67
PTPRF-205ENST00000414879 OR4K15Q8NH41 348 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 ST6GALNAC5Q9BVH7 336 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 NKX6-3A6NJ46 265 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 HRO43593 1189 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 PEX14O75381 377 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 WISP3O95389 354 aaPredicted RBP10.89□□□□□ -0.67
PTPRF-205ENST00000414879 PAHP00439 452 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 HIST1H1CP16403 213 aaKnown RBP10.89□□□□□ -0.67
PTPRF-205ENST00000414879 SNU13P55769 128 aaKnown RBP10.89□□□□□ -0.67
PTPRF-205ENST00000414879 ZXDAP98168 799 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 LACC1Q8IV20 430 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 C12orf45Q8N5I9 185 aaPredicted RBP10.89□□□□□ -0.67
PTPRF-205ENST00000414879 ARL6Q9H0F7 186 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 CLEC1BQ9P126 229 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 A0A0A6YYH2 397 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 A6NJ64 397 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 HPP00738 406 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 RAP2BP61225 183 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 TPBGQ13641 420 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 LIPNQ5VXI9 398 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 YRDCQ86U90 279 aaKnown RBP10.89□□□□□ -0.67
PTPRF-205ENST00000414879 NKX3-1Q99801 234 aaPredicted RBP10.89□□□□□ -0.67
PTPRF-205ENST00000414879 SLC25A31Q9H0C2 315 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 PPA2Q9H2U2 334 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 BCO1Q9HAY6 547 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 SDHAF2Q9NX18 166 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 OSGIN1Q9UJX0 560 aa10.89□□□□□ -0.67
PTPRF-205ENST00000414879 KIR2DS1A0A191URI9 304 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 ACOD1A6NK06 481 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 GAAP10253 952 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 ABCD3P28288 659 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 KIR2DS4P43632 304 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 CLN3Q13286 438 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 DOC2BQ14184 412 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 KIR2DS1Q14954 304 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 BPIFB2Q8N4F0 458 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 FAM3DQ96BQ1 224 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 C8orf44Q96CB5 159 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 SLAMF6Q96DU3 332 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 OCSTAMPQ9BR26 566 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 NOX3Q9HBY0 568 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 P4HTMQ9NXG6 502 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 FAM166BA8MTA8 275 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 NFYAP23511 347 aaPredicted RBP10.88□□□□□ -0.67
PTPRF-205ENST00000414879 RPL23AP62750 156 aaKnown RBP10.88□□□□□ -0.67
PTPRF-205ENST00000414879 ACSM5Q6NUN0 579 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 DEGS2Q6QHC5 323 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 KIRREL2Q6UWL6 708 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 ITFG2Q969R8 447 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 MED18Q9BUE0 208 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 TREM1Q9NP99 234 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 RBFOX1Q9NWB1 397 aaKnown RBP10.88□□□□□ -0.67
PTPRF-205ENST00000414879 LCTP09848 1927 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 TRABD2BA6NFA1 517 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 B4E171 279 aa10.88□□□□□ -0.67
PTPRF-205ENST00000414879 DHHO43323 396 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms