RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CCDC80Q76M96 950 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 VTCN1Q7Z7D3 282 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 RANBP3LQ86VV4 465 aaPredicted RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 CARM1Q86X55 608 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 MEX3DQ86XN8 651 aaKnown RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 LURAP1LQ8IV03 231 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 SLC30A8Q8IWU4 369 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 ZNF100Q8IYN0 542 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 UBE2J2Q8N2K1 259 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 C10orf53Q8N6V4 93 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 IL17DQ8TAD2 202 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 PIGXQ8TBF5 258 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 ASB10Q8WXI3 467 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 PROX1Q92786 737 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 TAAR8Q969N4 342 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 FAM162AQ96A26 154 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 CMTM5Q96DZ9 223 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 ZHX1-C8orf76Q96EF9 292 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 Q96MF0 132 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 NR1H4Q96RI1 486 aaPredicted RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 SH3GL1Q99961 368 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 KCTD14Q9BQ13 255 aaPredicted RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 NAA11Q9BSU3 229 aaPredicted RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 MED18Q9BUE0 208 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 TAPBPLQ9BX59 468 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 TRIM2Q9C040 744 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 LIME1Q9H400 295 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 EFCAB1Q9HAE3 211 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 TMEM27Q9HBJ8 222 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 MCCC2Q9HCC0 563 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 PLSCR4Q9NRQ2 329 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 MRGBPQ9NV56 204 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 SELENONQ9NZV5 590 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 KLHL9Q9P2J3 617 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 RHCGQ9UBD6 479 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 KCNN3Q9UGI6 736 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 NOSIPQ9Y314 301 aaKnown RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 HDGFL3Q9Y3E1 203 aa4.29□□□□□ -1.72
VPS41-205ENST00000414632 RAI1Q7Z5J4 1906 aaPredicted RBP4.29□□□□□ -1.72
VPS41-205ENST00000414632 NOTCH2Q04721 2471 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 A0A1W2PPR1 153 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 hCG_1807616A0A1W2PRN6 198 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 A6NNC1 897 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 ZNF724A8MTY0 619 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 FTCDNL1E5RQL4 147 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 C11orf98E9PRG8 122 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 C16orf97H3BN30 126 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 MPPED1O15442 326 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 NPIPB7O75200 414 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 MRPL33O75394 65 aaKnown RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 RAD51DO75771 328 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 DCTN3O75935 186 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 LYPD3O95274 346 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 HPRP00739 348 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SERPINA1P01009 418 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 BGLAPP02818 100 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SPARCP09486 303 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 PNMTP11086 282 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 EGR2P11161 476 aaPredicted RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 HLA-DOBP13765 273 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 NQO1P15559 274 aaKnown RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 CDH2P19022 906 aaPredicted RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 IGHV1-2P23083 117 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 IL32P24001 234 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 FPR3P25089 353 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 PCSK6P29122 969 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 PRDX6P30041 224 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SSTR2P30874 369 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 KDELR2P33947 212 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 OR3A2P47893 321 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 CLK1P49759 484 aaKnown RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 SELENOPP49908 381 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 P2RY4P51582 365 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 CLDN17P56750 224 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 TAS2R41P59536 307 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 H3F3AP84243 136 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SORDQ00796 357 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 VEZF1Q14119 521 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 GKAP1Q5VSY0 366 aaPredicted RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 EEF1A1P5Q5VTE0 462 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 FAM91A1Q658Y4 838 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 TMEM225Q6GV28 225 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 C8orf82Q6P1X6 216 aaPredicted RBP4.28□□□□□ -1.72
VPS41-205ENST00000414632 ERICH5Q6P6B1 374 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 ULK3Q6PHR2 472 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 PAQR6Q6TCH4 344 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 HACD2Q6Y1H2 254 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 STAC2Q6ZMT1 411 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 USP51Q70EK9 711 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 ARPINQ7Z6K5 226 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 NKAIN4Q8IVV8 208 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 WDFY1Q8IWB7 410 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 DEFB107AQ8IZN7 70 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 GABRG1Q8N1C3 465 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 SLC43A2Q8N370 569 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 LRRC17Q8N6Y2 441 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 ZIC4Q8N9L1 334 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 CCDC197Q8NCU1 140 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 OR9K2Q8NGE7 335 aa4.28□□□□□ -1.72
VPS41-205ENST00000414632 PFN4Q8NHR9 129 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms