RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DIO1P49895 249 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 METAP1P53582 386 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 BLOC1S1P78537 153 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 DESI1Q6ICB0 168 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 LCN10Q6JVE6 187 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 KDM8Q8N371 416 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 EMC6Q9BV81 110 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 S1PR5Q9H228 398 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 MMP28Q9H239 520 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 TXNIPQ9H3M7 391 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 PRELID3BQ9Y3B1 194 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 TMEM82A0PJX8 343 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 ZNF705EA8MWA4 302 aaPredicted RBP15.77■□□□□ 0.12
PHRF1-202ENST00000413872 BOLA2-SMG1P6H3BVE0 249 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 TOX3O15405 576 aaPredicted RBP15.77■□□□□ 0.12
PHRF1-202ENST00000413872 CXCL13O43927 109 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 ATP1B1P05026 303 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 TPT1P13693 172 aaKnown RBP15.77■□□□□ 0.12
PHRF1-202ENST00000413872 LGALS4P56470 323 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 RRAS2P62070 204 aaPredicted RBP15.77■□□□□ 0.12
PHRF1-202ENST00000413872 TCTN3Q6NUS6 607 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 TMEM92Q6UXU6 159 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 PHC2Q8IXK0 858 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 ANKRD53Q8N9V6 530 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 OR5D18Q8NGL1 313 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
PHRF1-202ENST00000413872 TRIB1Q96RU8 372 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 BCO1Q9HAY6 547 aa15.77■□□□□ 0.12
PHRF1-202ENST00000413872 SLC22A23A1A5C7 686 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 OTOL1A6NHN0 477 aaPredicted RBP15.77■□□□□ 0.11
PHRF1-202ENST00000413872 TBXA2RP21731 343 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 LAP3P28838 519 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 SH2D5Q6ZV89 423 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 ABHD6Q9BV23 337 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 HIPK2Q9H2X6 1198 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 ZNF346Q9UL40 294 aaKnown RBP15.77■□□□□ 0.11
PHRF1-202ENST00000413872 ANKUB1A6NFN9 424 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 DSCR4P56555 118 aaPredicted RBP15.77■□□□□ 0.11
PHRF1-202ENST00000413872 FOXC1Q12948 553 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 TMEM215Q68D42 235 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 GABARAPL3Q9BY60 117 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 SLC25A19Q9HC21 320 aa15.77■□□□□ 0.11
PHRF1-202ENST00000413872 MAP1BP46821 2468 aaKnown RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 ZNF891A8MT65 544 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 SSX5O60225 188 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 PTGS2P35354 604 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 SNCAP37840 140 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 ALDH3B2P48448 385 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 RPL18Q07020 188 aaKnown RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 OR2A2Q6IF42 318 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 GUSBP11Q6P575 273 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 TCEAL2Q9H3H9 227 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 LANCL2Q9NS86 450 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 C1orf123Q9NWV4 160 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 COL5A3P25940 1745 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 A0A1W2PNR3 127 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 ZNF732B4DXR9 585 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 SPI1P17947 270 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 CD53P19397 219 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 CLDN15P56746 228 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 RAP2BP61225 183 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 SPEM2Q0P670 501 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 GK2Q14410 553 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 CLPPQ16740 277 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 FAM109BQ6ICB4 259 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 RNF170Q96K19 258 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 ACKR4Q9NPB9 350 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 IFNA4P05014 189 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 SRMP19623 302 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 SIGLEC14Q08ET2 396 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 GLYATL3Q5SZD4 288 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 LIPNQ5VXI9 398 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 RNF165Q6ZSG1 346 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 NANOGP1Q8N7R0 232 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 FAM71CQ8NEG0 241 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 OR52H1Q8NGJ2 320 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 MAFIPQ8WZ33 124 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 BORCS7Q96B45 105 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 SLAMF6Q96DU3 332 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 SLC22A11Q9NSA0 550 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 PTTG3PQ9NZH4 202 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 A3GALT2U3KPV4 340 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 KIR2DS1A0A191URI9 304 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 XRCC2O43543 280 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 HRO43593 1189 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 JUNBP17275 347 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 PSMB1P20618 241 aaKnown RBP15.76■□□□□ 0.11
PHRF1-202ENST00000413872 KIR2DS4P43632 304 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 KIR2DS1Q14954 304 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 FBXW12Q6X9E4 464 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 GDPD3Q7L5L3 318 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 OVCH1Q7RTY7 1134 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 SYS1Q8N2H4 156 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 OR5M11Q96RB7 305 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 PRDM7Q9NQW5 492 aa15.76■□□□□ 0.11
PHRF1-202ENST00000413872 A6NIN4 97 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 SHOXO15266 292 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 SBK3P0C264 359 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 RBP2P50120 134 aa15.75■□□□□ 0.11
PHRF1-202ENST00000413872 SYT9Q86SS6 491 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms