RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 KRCC1Q9NPI7 259 aaPredicted RBP16.29■□□□□ 0.2
TRIM56-202ENST00000412507 TAS2R1Q9NYW7 299 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 TCRBV5S2A0A599 114 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 UNC119BA6NIH7 251 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 B9A039 149 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 NDUFB2O95178 105 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 NPR2P20594 1047 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 NR4A1P22736 598 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 FXYD6P3P58550 94 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 MS4A2Q01362 244 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 TRIM25Q14258 630 aaKnown RBP16.28■□□□□ 0.2
TRIM56-202ENST00000412507 MTX3Q5HYI7 312 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 THSD4Q6ZMP0 1018 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 DNM1P46Q6ZS02 220 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 Q71RC1 249 aaPredicted RBP16.28■□□□□ 0.2
TRIM56-202ENST00000412507 TRPM8Q7Z2W7 1104 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 FAM122BQ7Z309 247 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 ZER1Q7Z7L7 766 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 DHFR2Q86XF0 187 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 FNDC8Q8TC99 324 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 CLPTM1LQ96KA5 538 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 ZNF570Q96NI8 536 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 NDEL1Q9GZM8 345 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 MUC13Q9H3R2 512 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 IL20RAQ9UHF4 553 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 PRPF19Q9UMS4 504 aaKnown RBP16.28■□□□□ 0.2
TRIM56-202ENST00000412507 ABCA1O95477 2261 aa16.28■□□□□ 0.2
TRIM56-202ENST00000412507 VSTM5A8MXK1 200 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 RNF223E7ERA6 249 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 OR10H3O60404 316 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 MMP7P09237 267 aaPredicted RBP16.27■□□□□ 0.2
TRIM56-202ENST00000412507 EFNB3Q15768 340 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 MESTQ5EB52 335 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 LCN8Q6JVE9 175 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 DPPA2Q7Z7J5 298 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 SLC30A7Q8NEW0 376 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 RASD2Q96D21 266 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 C1orf21Q9H246 121 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 KCNN2Q9H2S1 579 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 NRIP3Q9NQ35 241 aa16.27■□□□□ 0.2
TRIM56-202ENST00000412507 TEX13CA0A0J9YWL9 993 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 A0A1W2PPL8 197 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 XKRYO14609 159 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 GPRIN2O60269 458 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 MGRN1O60291 552 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 UBOX5O94941 541 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 LY6G6DO95868 133 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 CCL2P13500 99 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 GALK2Q01415 458 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 CLEC9AQ6UXN8 241 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 SVOPLQ8N434 492 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 MAPK1IP1LQ8NDC0 245 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 SORCS2Q96PQ0 1159 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 VRK1Q99986 396 aaPredicted RBP16.26■□□□□ 0.19
TRIM56-202ENST00000412507 THTPAQ9BU02 230 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 PLK3Q9H4B4 646 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 CCNB1IP1Q9NPC3 277 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 TMCC3Q9ULS5 477 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 SPEF1Q9Y4P9 236 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 IER3IP1Q9Y5U9 82 aa16.26■□□□□ 0.19
TRIM56-202ENST00000412507 TMEM129A0AVI4 362 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 SLC22A23A1A5C7 686 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 LY6HO94772 140 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 ZNF32P17041 273 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 SDHAP31040 664 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 GLRXP35754 106 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 EFNA4P52798 201 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 CBX1P83916 185 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 PLP2Q04941 152 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 KRR1Q13601 381 aaKnown RBP16.25■□□□□ 0.19
TRIM56-202ENST00000412507 MSMPQ1L6U9 139 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 FAM27BQ5VT28 67 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 SMARCD3Q6STE5 483 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 FOXL2NBQ6ZUU3 175 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 PAQR4Q8N4S7 273 aaPredicted RBP16.25■□□□□ 0.19
TRIM56-202ENST00000412507 ZNF525Q8N782 197 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 CCDC124Q96CT7 223 aaKnown RBP16.25■□□□□ 0.19
TRIM56-202ENST00000412507 GPX7Q96SL4 187 aaPredicted RBP16.25■□□□□ 0.19
TRIM56-202ENST00000412507 RHNO1Q9BSD3 238 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 REG4Q9BYZ8 158 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 CDH20Q9HBT6 801 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 CMAHPQ9Y471 501 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 LYVE1Q9Y5Y7 322 aa16.25■□□□□ 0.19
TRIM56-202ENST00000412507 IQCMA0A1B0GVH7 501 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 PRSS37A4D1T9 235 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 SOCS2O14508 198 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 PTHP01270 115 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 SCG5P05408 212 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 APEX1P27695 318 aaKnown RBP16.24■□□□□ 0.19
TRIM56-202ENST00000412507 LAP3P28838 519 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 GUCA1AP43080 201 aaPredicted RBP16.24■□□□□ 0.19
TRIM56-202ENST00000412507 MAGEA2P43356 314 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 RIPPLY3P57055 190 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 HSF2Q03933 536 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 PABPC1L2AQ5JQF8 200 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 GPR139Q6DWJ6 353 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 CLEC2AQ6UVW9 174 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 DPY19L2P2Q6ZN68 376 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 FANK1Q8TC84 345 aa16.24■□□□□ 0.19
TRIM56-202ENST00000412507 ASB9Q96DX5 294 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms