RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CSF3P09919 207 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 CT45A8P0DMV1 189 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 CT45A9P0DMV2 189 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 BCKDHAP12694 445 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 IGFBP2P18065 325 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 PRPS1L1P21108 318 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 PSMA1P25786 263 aaKnown RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 EPHA2P29317 976 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 IL12BP29460 328 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 CALCRP30988 508 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 NTSP30990 170 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 S100A3P33764 101 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 HTR2BP41595 481 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 KIR2DL3P43628 341 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 CBX5P45973 191 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SLC9A3P48764 834 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 ETV1P50549 477 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 NCBP2P52298 156 aaKnown RBP eCLIP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 PNLIPRP2P54317 469 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 WNT3P56703 355 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 CLDN20P56880 219 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 RRAS2P62070 204 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SELENOWP63302 87 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 KCNJ10P78508 379 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 VLDLRP98155 873 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 EFNB1P98172 346 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 RUNX1T1Q06455 604 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 ZNF155Q12901 538 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 FOXF2Q12947 444 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 MLLT11Q13015 90 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 MYBPHQ13203 477 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 MAB21L1Q13394 359 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SNTA1Q13424 505 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 TPBGQ13641 420 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 DGCR6Q14129 220 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 GRK1Q15835 563 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 HSPB2Q16082 182 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SSX1Q16384 188 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 BAK1Q16611 211 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SLC25A35Q3KQZ1 300 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 FAM174BQ3ZCQ3 159 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 ACSF3Q4G176 576 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 EIPR1Q53HC9 387 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 CT45A2Q5DJT8 189 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 NOXRED1Q6NXP6 359 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 MZT2BQ6NZ67 158 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 NPSR1Q6W5P4 371 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SEM1Q6ZVN7 128 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 AHSA2Q719I0 299 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 ZNF551Q7Z340 670 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 WDR53Q7Z5U6 358 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 KCTD20Q7Z5Y7 419 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 TSEN54Q7Z6J9 526 aaKnown RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 CXorf67Q86X51 503 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 KIF18BQ86Y91 864 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 PTOV1Q86YD1 416 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SLC44A2Q8IWA5 706 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 PM20D2Q8IYS1 436 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SLC38A6Q8IZM9 456 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 CADM2Q8N3J6 435 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 NANOGP1Q8N7R0 232 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 WDSUB1Q8N9V3 476 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 OR4A15Q8NGL6 344 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 OR5H6Q8NGV6 325 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 GOT1L1Q8NHS2 421 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 TMEM163Q8TC26 289 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 GPR151Q8TDV0 419 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 CREB3L1Q96BA8 519 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SLC35A4Q96G79 324 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 WDYHV1Q96HA8 205 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 NEDD4LQ96PU5 975 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 ZNF559Q9BR84 538 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 BARHL1Q9BZE3 327 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 OR51E2Q9H255 320 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 GLIPR2Q9H4G4 154 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 RIBC2Q9H4K1 309 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 RANBP3Q9H6Z4 567 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 LRTM1Q9HBL6 345 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 MCCC2Q9HCC0 563 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 HHATLQ9HCP6 504 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 GALNT9Q9HCQ5 603 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 RANGRFQ9HD47 186 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 C12orf4Q9NQ89 552 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 FAM120CQ9NX05 1096 aaKnown RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 NDUFB11Q9NX14 153 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 THUMPD1Q9NXG2 353 aaKnown RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 GLTPQ9NZD2 209 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 EMC3Q9P0I2 261 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 PDP1Q9P0J1 537 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 KIF17Q9P2E2 1029 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 PFDN2Q9UHV9 154 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 ATP6V1HQ9UI12 483 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 BTNL2Q9UIR0 455 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 TMCC3Q9ULS5 477 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 EXO1Q9UQ84 846 aaKnown RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 SAMHD1Q9Y3Z3 626 aaKnown RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 OR10H1Q9Y4A9 318 aa4.73□□□□□ -1.65
LINC00342-201ENST00000412393 ANKRD17O75179 2603 aaKnown RBP4.73□□□□□ -1.65
LINC00342-201ENST00000412393 HEATR5AQ86XA9 2040 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms