RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TRAM2Q15035 370 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 KIAA0040Q15053 153 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SF3A2Q15428 464 aaKnown RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SSX1Q16384 188 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 DUSP5Q16690 384 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 HADHQ16836 314 aaKnown RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TIMM50Q3ZCQ8 353 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 VPS26BQ4G0F5 336 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 FAM74A3Q4VXF1 159 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 PAGE3Q5JUK9 113 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 FRMPD2BQ6IN97 320 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TCEAL6Q6IPX3 200 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 RAB12Q6IQ22 244 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SLC25A25Q6KCM7 469 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 DNAJC24Q6P3W2 148 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 FAHD1Q6P587 224 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SLC39A4Q6P5W5 647 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 PLET1Q6UQ28 207 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 NPSR1Q6W5P4 371 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 HSDL2Q6YN16 418 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TMPRSS11AQ6ZMR5 421 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TMEM179Q6ZVK1 233 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 BTN2A1Q7KYR7 527 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TRMT11Q7Z4G4 463 aaKnown RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 C5orf24Q7Z6I8 188 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZER1Q7Z7L7 766 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 LHFPL3Q86UP9 236 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 PAQR7Q86WK9 346 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CALHM3Q86XJ0 350 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 STX12Q86Y82 276 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 PSTKQ8IV42 348 aaKnown RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CDKL3Q8IVW4 592 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 NAXDQ8IW45 347 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SERPINA12Q8IW75 414 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ENTHD1Q8IYW4 607 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 THEM5Q8N1Q8 247 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 STX19Q8N4C7 294 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TBC1D19Q8N5T2 526 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TEX26Q8N6G2 289 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 LRRC17Q8N6Y2 441 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 FAM86B1Q8N7N1 296 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CLDN22Q8N7P3 220 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SIDT2Q8NBJ9 832 aaKnown RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TMEM178AQ8NBL3 297 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CLEC1AQ8NC01 280 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZNF540Q8NDQ6 660 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TMEM161BQ8NDZ6 487 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 IPMKQ8NFU5 416 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR4F6Q8NGB9 312 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR11H7Q8NGC8 314 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR8J3Q8NGG0 315 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR1S1Q8NH92 325 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 JOSD2Q8TAC2 188 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZNF461Q8TAF7 563 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 NANPQ8TBE9 248 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZNF675Q8TD23 568 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZNF431Q8TF32 576 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZNF606Q8WXB4 792 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CPNE4Q96A23 557 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 RFT1Q96AA3 541 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SLC25A46Q96AG3 418 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ULK4Q96C45 1275 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 MRPL38Q96DV4 380 aaKnown RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CCDC126Q96EE4 140 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 L3HYPDHQ96EM0 354 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CERS2Q96G23 380 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CELF6Q96J87 481 aaKnown RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 VPS39Q96JC1 886 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 Q96MT0 163 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 GUCD1Q96NT3 240 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 COL21A1Q96P44 957 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 MCEEQ96PE7 176 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 QKIQ96PU8 341 aaKnown RBP eCLIP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SLC38A2Q96QD8 506 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 PEBP4Q96S96 227 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZBTB18Q99592 522 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 FAM213AQ9BRX8 229 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 C2orf88Q9BSF0 95 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CCM2Q9BSQ5 444 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SPXQ9BT56 116 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TMEM43Q9BTV4 400 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 NTMT1Q9BV86 223 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 GABARAPL3Q9BY60 117 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 GSDMCQ9BYG8 508 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 PRRG3Q9BZD7 231 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CCDC90BQ9GZT6 254 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 WWTR1Q9GZV5 400 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 DPEP2Q9H4A9 486 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 ANKRD19PQ9H560 264 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CAB39LQ9H9S4 337 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 VAT1LQ9HCJ6 419 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 DCAF13Q9NV06 445 aaKnown RBP2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 RNF186Q9NXI6 227 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 VNN3Q9NY84 501 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 TREM2Q9NZC2 230 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CD274Q9NZQ7 290 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 COPZ2Q9P299 210 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 SEC14L3Q9UDX4 400 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 CYTH4Q9UIA0 394 aa2.06□□□□□ -2.08
HMGB3P2-201ENST00000411913 LAMP5Q9UJQ1 280 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms