RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 EXOSC4Q9NPD3 245 aaKnown RBP11.06□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF71Q9NQZ8 489 aaPredicted RBP11.06□□□□□ -0.64
CHMP3-204ENST00000409727 BABAM2Q9NXR7 383 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 MCTS1Q9ULC4 181 aaKnown RBP11.06□□□□□ -0.64
CHMP3-204ENST00000409727 CLEC4AQ9UMR7 237 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 TP53TG5Q9Y2B4 290 aa11.06□□□□□ -0.64
CHMP3-204ENST00000409727 DNAJC13O75165 2243 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 DMXL2Q8TDJ6 3036 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF701M0R085 212 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-204ENST00000409727 AHCYL1O43865 530 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 CYTIPO60759 359 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF823P16415 610 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 PSMB10P40306 273 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 ACTA2P62736 377 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 RPS25P62851 125 aaKnown RBP11.05□□□□□ -0.64
CHMP3-204ENST00000409727 ACTG2P63267 376 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 LRFN4Q6PJG9 635 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 Q6ZS92 163 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 VASH1Q7L8A9 365 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-204ENST00000409727 LINC00346Q8IVM7 164 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 GLB1L2Q8IW92 636 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 SLC26A10Q8NG04 563 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 NDNFQ8TB73 568 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 WDYHV1Q96HA8 205 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 AMELYQ99218 206 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 TM9SF2Q99805 663 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 CENPOQ9BU64 300 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 TMED9Q9BVK6 235 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 TRIM36Q9NQ86 728 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 ACOXLQ9NUZ1 547 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 NDUFB11Q9NX14 153 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 GLTPQ9NZD2 209 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 IKZF2Q9UKS7 526 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 B3GNT3Q9Y2A9 372 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 SIRT4Q9Y6E7 314 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-204ENST00000409727 MGAQ8IWI9 3026 aa11.05□□□□□ -0.64
CHMP3-204ENST00000409727 RPP14O95059 124 aaKnown RBP11.04□□□□□ -0.64
CHMP3-204ENST00000409727 OR8G3PP0DMU2 310 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 ENTPD1P49961 510 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 BLVRAP53004 296 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 HSF2Q03933 536 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 EIF2B1Q14232 305 aaKnown RBP11.04□□□□□ -0.64
CHMP3-204ENST00000409727 BCL2A1Q16548 175 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 PLEKHN1Q494U1 663 aaPredicted RBP11.04□□□□□ -0.64
CHMP3-204ENST00000409727 CDONQ4KMG0 1287 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 CORO6Q6QEF8 472 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 AAED1Q7RTV5 226 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 TMEM123Q8N131 208 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 C11orf40Q8WZ69 217 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 MARCH7Q9H992 704 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 GPX5O75715 221 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF432O94892 652 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 IGHV3-9P01782 118 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 FAM87AP0C7U9 286 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 GAAP10253 952 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF182P17025 639 aaPredicted RBP11.04□□□□□ -0.64
CHMP3-204ENST00000409727 ALOX5APP20292 161 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 PSMA1P25786 263 aaKnown RBP11.04□□□□□ -0.64
CHMP3-204ENST00000409727 LAP3P28838 519 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 PTGS2P35354 604 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 SLC3A1Q07837 685 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 HIST3H3Q16695 136 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 SLC25A47Q6Q0C1 308 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 ARL9Q6T311 187 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 YIPF7Q8N8F6 280 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 OR10H5Q8NGA6 315 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 OR5M9Q8NGP3 310 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 OTOSQ8NHW6 89 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 RNF128Q8TEB7 428 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 PELI1Q96FA3 418 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 CDADC1Q9BWV3 514 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 RBM24Q9BX46 236 aaKnown RBP11.04□□□□□ -0.64
CHMP3-204ENST00000409727 CALHM2Q9HA72 323 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 EMC7Q9NPA0 242 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 PIEZO1Q92508 2521 aa11.04□□□□□ -0.64
CHMP3-204ENST00000409727 A0A1B0GTH9 108 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 CENPBD1B2RD01 187 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 UPK3AO75631 287 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 WNT11O96014 354 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 IGHG3P01860 377 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 NFATC3Q12968 1075 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 TPBGQ13641 420 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 SLC18B1Q6NT16 456 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 LRRN1Q6UXK5 716 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 FAM220AQ7Z4H9 259 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 MCEMP1Q8IX19 187 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 TUSC5Q8IXB3 177 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 TMEM54Q969K7 222 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 PNPLA2Q96AD5 504 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 TRMT61AQ96FX7 289 aaKnown RBP11.03□□□□□ -0.64
CHMP3-204ENST00000409727 ALKBH3Q96Q83 286 aaPredicted RBP11.03□□□□□ -0.64
CHMP3-204ENST00000409727 ULBP2Q9BZM5 246 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 ISYNA1Q9NPH2 558 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 PAQR5Q9NXK6 330 aaPredicted RBP11.03□□□□□ -0.64
CHMP3-204ENST00000409727 STUB1Q9UNE7 303 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 POLR1DQ9Y2S0 133 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 NOSIPQ9Y314 301 aaKnown RBP11.03□□□□□ -0.64
CHMP3-204ENST00000409727 TMEM14AQ9Y6G1 99 aa11.03□□□□□ -0.64
CHMP3-204ENST00000409727 TAF4O00268 1085 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms