RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 OR11G2Q8NGC1 345 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 HUS1BQ8NHY5 278 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 HAVCR2Q8TDQ0 301 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 THEM6Q8WUY1 208 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CCDC107Q8WV48 283 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 MRPS31Q92665 395 aaKnown RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 TFGQ92734 400 aaPredicted RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 LRR1Q96L50 414 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 LRFN5Q96NI6 719 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 PCYT2Q99447 389 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 S100A13Q99584 98 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 GPR61Q9BZJ8 451 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 ABCG8Q9H221 673 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 ARRDC1-AS1Q9H2J1 176 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 NOX3Q9HBY0 568 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 MYOZ1Q9NP98 299 aaPredicted RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 TREM1Q9NP99 234 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 MIEF1Q9NQG6 463 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 INPP5EQ9NRR6 644 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 NKIRAS2Q9NYR9 191 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 TVP23BQ9NYZ1 205 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 NLGN3Q9NZ94 848 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CALML5Q9NZT1 146 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 UPB1Q9UBR1 384 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 RASD1Q9Y272 281 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 TMEM184BQ9Y519 407 aaPredicted RBP4.93□□□□□ -1.62
CLK1-202ENST00000409403 TRPV2Q9Y5S1 764 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 F8P00451 2351 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 ZFHX3Q15911 3703 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 CACNA1EQ15878 2313 aa4.93□□□□□ -1.62
CLK1-202ENST00000409403 TMEM72A0PK05 275 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 LRIT2A6NDA9 550 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 GGT3PA6NGU5 568 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 C4orf47A7E2U8 309 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 HEPACAM2A8MVW5 462 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 MGST3O14880 152 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 KLK10O43240 276 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 RNF13O43567 381 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TLX2O43763 284 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 OR10H3O60404 316 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 EIF4E2O60573 245 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 NDUFB6O95139 128 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CPSF4O95639 269 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 PTBP3O95758 552 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 LATS1O95835 1130 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 H1F0P07305 194 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 SPARCP09486 303 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CD3GP09693 182 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 COX5BP10606 129 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SLC25A4P12235 298 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ZNF35P13682 527 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 HIST1H1BP16401 226 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 CELP19835 753 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 NDUFS1P28331 727 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 PDHA2P29803 388 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 DDTP30046 118 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CD86P42081 329 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SRP9P49458 86 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 PPT1P50897 306 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 HOXA4Q00056 320 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 SLC14A1Q13336 389 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 RBMS2Q15434 407 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 RNASE10Q5GAN6 216 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 THEM4Q5T1C6 240 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 HIST2H3PS2Q5TEC6 136 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TMEM244Q5VVB8 128 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 FAM219BQ5XKK7 198 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 EIF5AL1Q6IS14 154 aaKnown RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 PAQR6Q6TCH4 344 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CEACAM20Q6UY09 585 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TMEM184AQ6ZMB5 413 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ZNF813Q6ZN06 617 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 LRRC70Q7Z2Q7 622 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 OR2W3Q7Z3T1 314 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ZNF546Q86UE3 836 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 COMTD1Q86VU5 262 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SLC35F3Q8IY50 421 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 POGLUT1Q8NBL1 392 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ADPRHL1Q8NDY3 354 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 DNAAF1Q8NEP3 725 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 DEFB124Q8NES8 71 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 CD200R1Q8TD46 325 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 EEF1AKMT1Q8WVE0 214 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TNFAIP8L1Q8WVP5 186 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SLAMF9Q96A28 289 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 SMARCD1Q96GM5 515 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 NOL4LQ96MY1 436 aaPredicted RBP4.92□□□□□ -1.62
CLK1-202ENST00000409403 TSSK3Q96PN8 268 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 ABHD1Q96SE0 405 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 EGFL8Q99944 293 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 DUSP26Q9BV47 211 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 WNT5BQ9H1J7 359 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 OR10A4Q9H209 315 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 UBQLN3Q9H347 655 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 MVB12BQ9H7P6 319 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 RDH14Q9HBH5 336 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 HRASLSQ9HDD0 168 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 NT5MQ9NPB1 228 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 TMEM184CQ9NVA4 438 aa4.92□□□□□ -1.62
CLK1-202ENST00000409403 MED17Q9NVC6 651 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms