RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CLDN17P56750 224 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 CLDN18P56856 261 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 GPR50Q13585 617 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 DOC2BQ14184 412 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 CDONQ4KMG0 1287 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 LIPKQ5VXJ0 399 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 ABLIM2Q6H8Q1 611 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 CDC20BQ86Y33 519 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 KLBQ86Z14 1044 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 OR6N2Q8NGY6 317 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 HAVCR2Q8TDQ0 301 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 C4orf36Q96KX1 117 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 EXO5Q9H790 373 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 KLHL9Q9P2J3 617 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 TVP23AA6NH52 213 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 J3QLW9 94 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 SYNGR4O95473 234 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 ZNF19P17023 458 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 CAMK2DQ13557 499 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 VASNQ6EMK4 673 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 LYPD4Q6UWN0 246 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 PLEKHG7Q6ZR37 379 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 KCTD20Q7Z5Y7 419 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 GLB1L2Q8IW92 636 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 INTS12Q96CB8 462 aaKnown RBP18.67■□□□□ 0.58
TPM1-208ENST00000404484 ISG20L2Q9H9L3 353 aaKnown RBP18.67■□□□□ 0.58
TPM1-208ENST00000404484 LAMP5Q9UJQ1 280 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 STUB1Q9UNE7 303 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 RCE1Q9Y256 329 aa18.67■□□□□ 0.58
TPM1-208ENST00000404484 COA3Q9Y2R0 106 aaPredicted RBP18.67■□□□□ 0.58
TPM1-208ENST00000404484 CYTIPO60759 359 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 HRGP04196 525 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 NR4A1P22736 598 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 GABRA5P31644 462 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 PTGS2P35354 604 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 MRPL28Q13084 256 aaKnown RBP18.66■□□□□ 0.58
TPM1-208ENST00000404484 ZNF169Q14929 603 aaPredicted RBP18.66■□□□□ 0.58
TPM1-208ENST00000404484 IGFBP7Q16270 282 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 VASH1Q7L8A9 365 aaPredicted RBP18.66■□□□□ 0.58
TPM1-208ENST00000404484 ZNF454Q8N9F8 522 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 SMAP2Q8WU79 429 aaPredicted RBP18.66■□□□□ 0.58
TPM1-208ENST00000404484 ASB17Q8WXJ9 295 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 TIMP4Q99727 224 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 MCTS1Q9ULC4 181 aaKnown RBP18.66■□□□□ 0.58
TPM1-208ENST00000404484 ALPK2Q86TB3 2170 aa18.66■□□□□ 0.58
TPM1-208ENST00000404484 MYO18BQ8IUG5 2567 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 A0A1W2PPW3 197 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 TACSTD2P09758 323 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 ZNF823P16415 610 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 CD53P19397 219 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 CSNK1A1P48729 337 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 ENTPD1P49961 510 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 GBX2P52951 348 aaPredicted RBP18.65■□□□□ 0.58
TPM1-208ENST00000404484 HCCSP53701 268 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 FMODQ06828 376 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 EGR3Q06889 387 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 HIST3H3Q16695 136 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 FCRLAQ7L513 359 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 SSX6Q7RTT6 188 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 FAM220AQ7Z4H9 259 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 KBTBD8Q8NFY9 601 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 SLC26A10Q8NG04 563 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 OTOSQ8NHW6 89 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 RPL3LQ92901 407 aaKnown RBP18.65■□□□□ 0.58
TPM1-208ENST00000404484 COQ7Q99807 217 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 CHCHD6Q9BRQ6 235 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 DEFB127Q9H1M4 99 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 OR51E2Q9H255 320 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 SSR3Q9UNL2 185 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 COPS3Q9UNS2 423 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 BAHCC1Q9P281 2608 aa18.65■□□□□ 0.58
TPM1-208ENST00000404484 LOC100506127A0A0U1RQW1 187 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 HSPB2A8KAH6 182 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 LALBAP00709 142 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 PCSK6P29122 969 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 OR12D2P58182 307 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 VBP1P61758 197 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 LSM3P62310 102 aaKnown RBP18.64■□□□□ 0.58
TPM1-208ENST00000404484 ADAM8P78325 824 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 AQP6Q13520 282 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 HSPB2Q16082 182 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 PRR30Q53SZ7 412 aaPredicted RBP18.64■□□□□ 0.58
TPM1-208ENST00000404484 TEX30Q5JUR7 227 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 SLC18B1Q6NT16 456 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 CHMP1BQ7LBR1 199 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 DPY19L4Q7Z388 723 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 OR6N1Q8NGY5 312 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 OR2M2Q96R28 347 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 DCUN1D5Q9BTE7 237 aa18.64■□□□□ 0.58
TPM1-208ENST00000404484 MRPL22Q9NWU5 206 aaKnown RBP18.64■□□□□ 0.58
TPM1-208ENST00000404484 ZNF716A6NP11 495 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 ZNF593O00488 134 aaPredicted RBP18.64■□□□□ 0.57
TPM1-208ENST00000404484 TMCC2O75069 709 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 SULT1C4O75897 302 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 IGHG3P01860 377 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 KRT8P05787 483 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 CELP19835 753 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 ALOX5APP20292 161 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 SRYQ05066 204 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 TRAM1Q15629 374 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms