RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 RPL4P36578 427 aaKnown RBP11.45□□□□□ -0.58
SDF4-203ENST00000403997 GUCA1AP43080 201 aaPredicted RBP11.45□□□□□ -0.58
SDF4-203ENST00000403997 GPR4P46093 362 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 GYS2P54840 703 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 RAP1BP61224 184 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 RAP1AP62834 184 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 MRPS34P82930 218 aaKnown RBP11.45□□□□□ -0.58
SDF4-203ENST00000403997 FMODQ06828 376 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 TBC1D28Q2M2D7 210 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 ANKDD1AQ495B1 522 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 THEM4Q5T1C6 240 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 C6orf52Q5T4I8 152 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 RGS7BPQ6MZT1 257 aaPredicted RBP11.45□□□□□ -0.58
SDF4-203ENST00000403997 SLC25A47Q6Q0C1 308 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 MBOAT2Q6ZWT7 520 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 LRP11Q86VZ4 500 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 HIPK1Q86Z02 1210 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 PAQR4Q8N4S7 273 aaPredicted RBP11.45□□□□□ -0.58
SDF4-203ENST00000403997 RNF148Q8N7C7 305 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 LRRC75AQ8NAA5 344 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 OR13C2Q8NGS9 318 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 UBASH3BQ8TF42 649 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 NMD3Q96D46 503 aaKnown RBP11.45□□□□□ -0.58
SDF4-203ENST00000403997 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 BPESC1Q9GZL8 116 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 OR51B6Q9H340 312 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 MS4A5Q9H3V2 200 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 SMURF2Q9HAU4 748 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 UGT2A1Q9Y4X1 527 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
SDF4-203ENST00000403997 IGHV4-61A0A0C4DH41 118 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 A0A1W2PPW3 197 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 IGHMP01871 453 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 H1F0P07305 194 aaKnown RBP11.44□□□□□ -0.58
SDF4-203ENST00000403997 MMP7P09237 267 aaPredicted RBP11.44□□□□□ -0.58
SDF4-203ENST00000403997 APEHP13798 732 aaKnown RBP11.44□□□□□ -0.58
SDF4-203ENST00000403997 CCNOP22674 350 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 APEX1P27695 318 aaKnown RBP11.44□□□□□ -0.58
SDF4-203ENST00000403997 APLNRP35414 380 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 RAD52P43351 418 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 ALDH3B1P43353 468 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 SLC9A3P48764 834 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 GZMKP49863 264 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 SELENOVP59797 346 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 ERVK-25P63136 954 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 GNGT1P63211 74 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 FHL1Q13642 323 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 MAD2L1BPQ15013 274 aaPredicted RBP11.44□□□□□ -0.58
SDF4-203ENST00000403997 ZBED5Q49AG3 693 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 PABPC1L2AQ5JQF8 200 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 FAM205BPQ63HN1 556 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 PODNL1Q6PEZ8 512 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 TSEN54Q7Z6J9 526 aaKnown RBP11.44□□□□□ -0.58
SDF4-203ENST00000403997 ZNF786Q8N393 782 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 CLDN22Q8N7P3 220 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 ICA1LQ8NDH6 482 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 FNDC8Q8TC99 324 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 TSPAN32Q96QS1 320 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 ANKRD19PQ9H560 264 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 DCAF13Q9NV06 445 aaKnown RBP11.44□□□□□ -0.58
SDF4-203ENST00000403997 NDUFAF4Q9P032 175 aa11.44□□□□□ -0.58
SDF4-203ENST00000403997 MYEF2Q9P2K5 600 aaKnown RBP11.44□□□□□ -0.58
SDF4-203ENST00000403997 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 CDC42EP2O14613 210 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 LCKP06239 509 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 ZNF32P17041 273 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 RHCEP18577 417 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 GIFP27352 417 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 UCP2P55851 309 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 KRT72Q14CN4 511 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 ALKBH6Q3KRA9 238 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 CHRFAM7AQ494W8 412 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 FGD3Q5JSP0 725 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 TMPRSS11FQ6ZWK6 438 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 ARIH2OSQ8N7S6 290 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 FAM156AQ8NDB6 213 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 CPEB3Q8NE35 698 aaKnown RBP11.43□□□□□ -0.58
SDF4-203ENST00000403997 ZNF519Q8TB69 540 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 SYNPRQ8TBG9 265 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 SLC7A13Q8TCU3 470 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 C11orf40Q8WZ69 217 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 NABP1Q96AH0 204 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 NDEL1Q9GZM8 345 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 TAAR3PQ9P1P4 343 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 GRHPRQ9UBQ7 328 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 SAMD4AQ9UPU9 718 aaKnown RBP11.43□□□□□ -0.58
SDF4-203ENST00000403997 TMEM5Q9Y2B1 443 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 ARL2BPQ9Y2Y0 163 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 V9GYQ6 96 aa11.43□□□□□ -0.58
SDF4-203ENST00000403997 LOC100289279A0A1B0GTE1 492 aa11.42□□□□□ -0.58
SDF4-203ENST00000403997 A0A1W2PPL8 197 aa11.42□□□□□ -0.58
SDF4-203ENST00000403997 A0A1W2PRQ8 180 aa11.42□□□□□ -0.58
SDF4-203ENST00000403997 XKRYO14609 159 aa11.42□□□□□ -0.58
SDF4-203ENST00000403997 LMX1BO60663 402 aa11.42□□□□□ -0.58
SDF4-203ENST00000403997 DIRAS1O95057 198 aa11.42□□□□□ -0.58
SDF4-203ENST00000403997 SNAP29O95721 258 aa11.42□□□□□ -0.58
SDF4-203ENST00000403997 CLPTM1O96005 669 aa11.42□□□□□ -0.58
SDF4-203ENST00000403997 CD14P08571 375 aa11.42□□□□□ -0.58
SDF4-203ENST00000403997 NAT2P11245 290 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms