RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MCOLN3Q8TDD5 553 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 CAPSLQ8WWF8 208 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 PIBF1Q8WXW3 757 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 STARD8Q92502 1023 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF75CPQ92670 426 aaPredicted RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 ECHDC3Q96DC8 303 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF578Q96N58 590 aaPredicted RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 C11orf70Q9BRQ4 267 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 DMAP1Q9NPF5 467 aaPredicted RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 RPRD1BQ9NQG5 326 aaKnown RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF226Q9NYT6 803 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 NUFIP1Q9UHK0 495 aaKnown RBP2.55□□□□□ -2
HMGB1P17-201ENST00000403495 ST3GAL6Q9Y274 331 aa2.55□□□□□ -2
HMGB1P17-201ENST00000403495 SCN2AQ99250 2005 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 USP47Q96K76 1375 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 ARPC4-TTLL3A0A0A6YYG9 625 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 GOLGA6L7A0A1B0GV03 622 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 A0A1B0GW55 424 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 PLAC8L1A1L4L8 177 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 H3BNH8 94 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 TMX2-CTNND1H3BSU7 103 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 SS18L1O75177 396 aaPredicted RBP2.54□□□□□ -2
HMGB1P17-201ENST00000403495 SLC25A27O95847 323 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 KRT14P02533 472 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 GNAO1P09471 354 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 DUX4L2P0CJ85 424 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 DUX4L3P0CJ86 424 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 DUX4L5P0CJ88 424 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 DUX4L6P0CJ89 424 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 DUX4L7P0CJ90 424 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 STAG3L3P0CL85 134 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 OR8G3PP0DMU2 310 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 CCT6AP40227 531 aaKnown RBP2.54□□□□□ -2
HMGB1P17-201ENST00000403495 CSNK1DP48730 415 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 RND2P52198 227 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF136P52737 540 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 UGT2B15P54855 530 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 RGS8P57771 180 aaPredicted RBP2.54□□□□□ -2
HMGB1P17-201ENST00000403495 LIPEQ05469 1076 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 MERTKQ12866 999 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 IL18Q14116 193 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 TTLL9Q3SXZ7 439 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 PTPN20Q4JDL3 420 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 CAVIN4Q5BKX8 364 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 C22orf42Q6IC83 251 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 DUX4L9Q6RFH8 374 aaPredicted RBP2.54□□□□□ -2
HMGB1P17-201ENST00000403495 BZW1Q7L1Q6 419 aaKnown RBP2.54□□□□□ -2
HMGB1P17-201ENST00000403495 BIVMQ86UB2 503 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 STPG2Q8N412 459 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 RNF175Q8N4F7 328 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 MREGQ8N565 214 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 BLOC1S5Q8TDH9 187 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 PEX13Q92968 403 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 MCUR1Q96AQ8 359 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 FAM3DQ96BQ1 224 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 ASB9Q96DX5 294 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF799Q96GE5 643 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 SERPINB12Q96P63 405 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 P2RX4Q99571 388 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 TEKT3Q9BXF9 490 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 SAMSN1Q9NSI8 373 aaKnown RBP2.54□□□□□ -2
HMGB1P17-201ENST00000403495 DUX4Q9UBX2 424 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 GOLT1BQ9Y3E0 138 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 WSB1Q9Y6I7 421 aa2.54□□□□□ -2
HMGB1P17-201ENST00000403495 INSRP06213 1382 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 IGHV3-64DA0A0J9YX35 117 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 MRPS12O15235 138 aaKnown RBP2.53□□□□□ -2
HMGB1P17-201ENST00000403495 CHST1O43916 411 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 CTAG2O75638 210 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 OR2F2O95006 317 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 C6orf47O95873 294 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 BGLAPP02818 100 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 FABP3P05413 133 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 PNMA6AP0CW24 399 aaPredicted RBP2.53□□□□□ -2
HMGB1P17-201ENST00000403495 NR2C1P13056 603 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 MGMTP16455 207 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 MDKP21741 143 aaPredicted RBP2.53□□□□□ -2
HMGB1P17-201ENST00000403495 BCKDHBP21953 392 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 RRM2P31350 389 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 SLC1A1P43005 524 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 UQCRFS1P47985 274 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 SSR4P51571 173 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 EIF3EP60228 445 aaKnown RBP2.53□□□□□ -2
HMGB1P17-201ENST00000403495 MXD1Q05195 221 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 TWF1Q12792 350 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 TMED1Q13445 227 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 MPPED2Q15777 294 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 HADHQ16836 314 aaKnown RBP2.53□□□□□ -2
HMGB1P17-201ENST00000403495 MBOAT1Q6ZNC8 495 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF493Q6ZR52 646 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 CENPQQ7L2Z9 268 aaPredicted RBP2.53□□□□□ -2
HMGB1P17-201ENST00000403495 OTUD6AQ7L8S5 288 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 STRADAQ7RTN6 431 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 TMCO2Q7Z6W1 182 aaPredicted RBP2.53□□□□□ -2
HMGB1P17-201ENST00000403495 LUZP2Q86TE4 346 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 OAFQ86UD1 273 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 MDS2Q8NDY4 140 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 OR6X1Q8NH79 312 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 PIK3IP1Q96FE7 263 aa2.53□□□□□ -2
HMGB1P17-201ENST00000403495 CEP170P1Q96L14 293 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms