RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 NXNL2Q5VZ03 156 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 FGD2Q7Z6J4 655 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 FAM109AQ8N4B1 249 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 OR6N2Q8NGY6 317 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 NKX3-1Q99801 234 aaPredicted RBP10.38□□□□□ -0.75
SKA3-203ENST00000400018 TXNIPQ9H3M7 391 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 MOV10Q9HCE1 1003 aaKnown RBP10.38□□□□□ -0.75
SKA3-203ENST00000400018 ENOPH1Q9UHY7 261 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 SNX5Q9Y5X3 404 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 A0A1W2PPL8 197 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 A0A1W2PR80 420 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 AQP7P3A6NL99 342 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 NOL3O60936 208 aaKnown RBP10.38□□□□□ -0.75
SKA3-203ENST00000400018 MT-ATP6P00846 226 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 TSPAN19P0C672 248 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 LRFN4Q6PJG9 635 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 DND1Q8IYX4 353 aaKnown RBP10.38□□□□□ -0.75
SKA3-203ENST00000400018 OR13C5Q8NGS8 318 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 NEIL3Q8TAT5 605 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 LIPHQ8WWY8 451 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 SLC7A6Q92536 515 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 POTEKPQ9BYX7 375 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 PRRG4Q9BZD6 226 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 MRPL22Q9NWU5 206 aaKnown RBP10.38□□□□□ -0.75
SKA3-203ENST00000400018 ZMAT5Q9UDW3 170 aaKnown RBP10.38□□□□□ -0.75
SKA3-203ENST00000400018 FLNCQ14315 2725 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 A0A1W2PPK0 400 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 CLDN25C9JDP6 229 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 J3QLW9 94 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 ZNF19P17023 458 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 ADH6P28332 368 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 GNG2P59768 71 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 SLC17A1Q14916 467 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 SPCS2Q15005 226 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 ZNF239Q16600 458 aaKnown RBP10.37□□□□□ -0.75
SKA3-203ENST00000400018 OCLNQ16625 522 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 LIPKQ5VXJ0 399 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 ALKBH2Q6NS38 261 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 NHLRC1Q6VVB1 395 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 CREB3L2Q70SY1 520 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 KLBQ86Z14 1044 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 OR9K2Q8NGE7 335 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 SPRYD4Q8WW59 207 aaPredicted RBP10.37□□□□□ -0.75
SKA3-203ENST00000400018 TRMT61AQ96FX7 289 aaKnown RBP10.37□□□□□ -0.75
SKA3-203ENST00000400018 SIGLEC11Q96RL6 698 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 TRIB1Q96RU8 372 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 DHRS9Q9BPW9 319 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 RACGAP1Q9H0H5 632 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 B9D1Q9UPM9 204 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 UGT2A1Q9Y4X1 527 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 A0A087WZY1 265 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 TRIM64A6NGJ6 449 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 IDH3BO43837 385 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 QDPRP09417 244 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 ZNF708P17019 499 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 PAICSP22234 425 aaKnown RBP10.37□□□□□ -0.75
SKA3-203ENST00000400018 HTR1FP30939 366 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 RASGEF1BQ0VAM2 473 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 TSTQ16762 297 aaKnown RBP10.37□□□□□ -0.75
SKA3-203ENST00000400018 FCRLAQ7L513 359 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 NUFIP2Q7Z417 695 aaKnown RBP10.37□□□□□ -0.75
SKA3-203ENST00000400018 THEM6Q8WUY1 208 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 OIT3Q8WWZ8 545 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 WDYHV1Q96HA8 205 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 ZNF649Q9BS31 505 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 RBM24Q9BX46 236 aaKnown RBP10.37□□□□□ -0.75
SKA3-203ENST00000400018 ASF1BQ9NVP2 202 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 HDGFL3Q9Y3E1 203 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 RPL36Q9Y3U8 105 aaKnown RBP10.37□□□□□ -0.75
SKA3-203ENST00000400018 HSPE1-MOB4S4R3N1 261 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 CADP27708 2225 aa10.37□□□□□ -0.75
SKA3-203ENST00000400018 A0A096LPE4 126 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 A0A1W2PPZ6 126 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 ANKRD61A6NGH8 418 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 TRIM64BA6NI03 449 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 SPARCP09486 303 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 TGM4P49221 684 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 TMPRSS3P57727 454 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 CLRN1P58418 232 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 SLC35A1P78382 337 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 ZNF85Q03923 595 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 FOXF2Q12947 444 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 ZNF846Q147U1 533 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 TMEM201Q5SNT2 666 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 GPALPP1Q8IXQ4 340 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 TMEM80Q96HE8 168 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 MAP6Q96JE9 813 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 TM9SF2Q99805 663 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 OR51E2Q9H255 320 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 ZDHHC11Q9H8X9 412 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 B3GALT5Q9Y2C3 310 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 DCHS2Q6V1P9 2916 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 CRYBG3Q68DQ2 2970 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 LOC100506127A0A0U1RQW1 187 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 ACOT7O00154 380 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 ARPC3O15145 178 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 IFNGP01579 166 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 SBK2P0C263 348 aa10.36□□□□□ -0.75
SKA3-203ENST00000400018 OR8G3PP0DMU2 310 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms