RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 FAM186AA6NE01 2351 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 TMEM200CA6NKL6 621 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 RFPL4AA6NLU0 287 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF850A8MQ14 1090 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 RFPL4AL1F8VTS6 287 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 STK17BO94768 372 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 NDUFB6O95139 128 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 HOXD4P09016 255 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 PTAFRP25105 342 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 OR1D4P47884 311 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 ALKBH1Q13686 389 aaKnown RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 CDKN3Q16667 212 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 LIPNQ5VXI9 398 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 MUC20Q8N307 709 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 SPACA1Q9HBV2 294 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 LRFN1Q9P244 771 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 A0A087WZY1 265 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 PEX12O00623 359 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 MPC2O95563 127 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 OR13C7P0DN81 318 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 HTR2CP28335 458 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 CTHP32929 405 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 PPP2CBP62714 309 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 PPP2CAP67775 309 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 CLINT1Q14677 625 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 HMGN3Q15651 99 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 COX15Q7KZN9 410 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 GABRG1Q8N1C3 465 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 SPICQ8N5J4 248 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 TEX19Q8NA77 164 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 OR5T1Q8NG75 326 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 MIOXQ9UGB7 285 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 SCN10AQ9Y5Y9 1956 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 TNS1Q9HBL0 1735 aaKnown RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 DVL2O14641 736 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 BCL2L11O43521 198 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 CALCBP10092 127 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 GLYATL3Q5SZD4 288 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 SEZ6L2Q6UXD5 910 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 TMEM64Q6YI46 380 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 C17orf47Q8NEP4 570 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 OR13H1Q8NG92 308 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 OR6S1Q8NH40 331 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 DAZLQ92904 295 aaKnown RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 MYADMQ96S97 322 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 HHLA2Q9UM44 414 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF726A6NNF4 738 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 MAN2B1O00754 1011 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 LSM11P83369 360 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 GUCA2AQ02747 115 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 DPPA2Q7Z7J5 298 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 SGPP2Q8IWX5 399 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC35A4Q96G79 324 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 WDR77Q9BQA1 342 aaPredicted RBP13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 ZFP64Q9NPA5 681 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 SDHAF3Q9NRP4 125 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 KIR2DS5A0A0G2JLQ3 304 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 A0A0G2JNG1 304 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 A0A1B0GWA3 101 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 KIR2DS3K7RE56 304 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 FBLP22087 321 aaKnown RBP13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 SNRPNP63162 240 aaKnown RBP13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 KIR2DS5Q14953 304 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 C9orf152Q5JTZ5 239 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 HAVCR2Q8TDQ0 301 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF75AQ96N20 296 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 CDCA3Q99618 268 aaPredicted RBP13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 C8orf33Q9H7E9 229 aaPredicted RBP13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 B3GALT1Q9Y5Z6 326 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 CCDC88CQ9P219 2028 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 PSMB6P28072 239 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 GOT1L1Q8NHS2 421 aaPredicted RBP13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 FAM213BQ8TBF2 198 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 HGDQ93099 445 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC41A2Q96JW4 573 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 SELENOIQ9C0D9 397 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC5A7Q9GZV3 580 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 ENKD1Q9H0I2 346 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 KIR3DX1Q9H7L2 352 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 SERINC1Q9NRX5 453 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 FBXO4Q9UKT5 387 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 LSM2Q9Y333 95 aaKnown RBP13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 KCNE3Q9Y6H6 103 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 ALPK2Q86TB3 2170 aa13.35□□□□□ -0.27
RPRD1A-202ENST00000399022 LCTP09848 1927 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 DCTN6O00399 190 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 TNFSF12O43508 249 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 TLX3O43711 291 aaPredicted RBP13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 PRKNO60260 465 aaPredicted RBP13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 APBB3O95704 486 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 ACY1Q03154 408 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 SHHQ15465 462 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 CAMKMTQ7Z624 323 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC30A7Q8NEW0 376 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 TESQ9UGI8 421 aaKnown RBP13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 FBXL4Q9UKA2 621 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 OR2T1O43869 369 aa13.34□□□□□ -0.27
RPRD1A-202ENST00000399022 HOXB3P14651 431 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms