RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.23■■□□□ 1.15
U2AF1-203ENST00000398137 GINS1Q14691 196 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 TBRG1Q3YBR2 411 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 THEM4Q5T1C6 240 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 OR7E24Q6IFN5 339 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 ALKBH2Q6NS38 261 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 SLC27A4Q6P1M0 643 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 ANKRD16Q6P6B7 361 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 FNDC8Q8TC99 324 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 HTRA1Q92743 480 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 EME1Q96AY2 570 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 MUS81Q96NY9 551 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 FOXB1Q99853 325 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 C9orf16Q9BUW7 83 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 NELFAQ9H3P2 528 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 VSX1Q9NZR4 365 aaPredicted RBP22.23■■□□□ 1.15
U2AF1-203ENST00000398137 DSCAMO60469 2012 aa22.23■■□□□ 1.15
U2AF1-203ENST00000398137 A0A1W2PR80 420 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 B4GALT1P15291 398 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 GRK5P34947 590 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 ZNF84P51523 738 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 ZNF133P52736 654 aaPredicted RBP22.22■■□□□ 1.15
U2AF1-203ENST00000398137 CRISP1P54107 249 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 TRIP10Q15642 601 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 TAB1Q15750 504 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 C10orf128Q5T292 105 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 TMEM236Q5W0B7 351 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 SLC25A47Q6Q0C1 308 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 KLHL24Q6TFL4 600 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 ZNF813Q6ZN06 617 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 C17orf78Q8N4C9 275 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 OR52N5Q8NH56 324 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 BCL2L2Q92843 193 aaPredicted RBP22.22■■□□□ 1.15
U2AF1-203ENST00000398137 FN3KQ9H479 309 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 GSX1Q9H4S2 264 aaPredicted RBP22.22■■□□□ 1.15
U2AF1-203ENST00000398137 SLC17A5Q9NRA2 495 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 USE1Q9NZ43 259 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 ROS1P08922 2347 aa22.22■■□□□ 1.15
U2AF1-203ENST00000398137 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.21■■□□□ 1.15
U2AF1-203ENST00000398137 AHCYL1O43865 530 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 RENP00797 406 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 ALPLP05186 524 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 CTLA4P16410 223 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 ESRRGP62508 458 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 DBPQ10586 325 aaPredicted RBP22.21■■□□□ 1.15
U2AF1-203ENST00000398137 TIMM23BQ5SRD1 257 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 ACSM5Q6NUN0 579 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 WFDC8Q8IUA0 241 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 CYB561A3Q8NBI2 242 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 IGFBPL1Q8WX77 278 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 RIBC2Q9H4K1 309 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 RERGLQ9H628 205 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 SLC25A19Q9HC21 320 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 TMEM38BQ9NVV0 291 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 UGT2A1Q9Y4X1 527 aa22.21■■□□□ 1.15
U2AF1-203ENST00000398137 SLC16A7O60669 478 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 PLAUP00749 431 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 EPHA2P29317 976 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 CDAP32320 146 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 GIPRP48546 466 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 ALDH3A2P51648 485 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 CDK5Q00535 292 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 ZBTB49Q6ZSB9 765 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 WDR31Q8NA23 367 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 NPEPL1Q8NDH3 523 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 HSD17B8Q92506 261 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 SNX18Q96RF0 628 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 SLC29A1Q99808 456 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 USB1Q9BQ65 265 aaKnown RBP22.2■■□□□ 1.14
U2AF1-203ENST00000398137 DCLRE1BQ9H816 532 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 UBTD1Q9HAC8 227 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 RPRD1BQ9NQG5 326 aaKnown RBP22.2■■□□□ 1.14
U2AF1-203ENST00000398137 ENOPH1Q9UHY7 261 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 KLHL21Q9UJP4 597 aa22.2■■□□□ 1.14
U2AF1-203ENST00000398137 A0A1W2PPL8 197 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 RIIAD1A6NNX1 92 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 PEX2P28328 305 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 TUBA1BP68363 451 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 TUBA4AP68366 448 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 NKX6-1P78426 367 aaPredicted RBP22.19■■□□□ 1.14
U2AF1-203ENST00000398137 PPA1Q15181 289 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 ETFDHQ16134 617 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 TUBA1AQ71U36 451 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 ZNF627Q7L945 461 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 P2RY8Q86VZ1 359 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 SLC37A3Q8NCC5 494 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 FOXN4Q96NZ1 517 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 TSSK2Q96PF2 358 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 GABARAPL3Q9BY60 117 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 NUAK2Q9H093 628 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 NKX1-2Q9UD57 310 aaPredicted RBP22.19■■□□□ 1.14
U2AF1-203ENST00000398137 ORC6Q9Y5N6 252 aa22.19■■□□□ 1.14
U2AF1-203ENST00000398137 ARID1AO14497 2285 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 OR6C68A6NDL8 312 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 IFNGP01579 166 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 UBE2NP61088 152 aaKnown RBP22.18■■□□□ 1.14
U2AF1-203ENST00000398137 CRMP1Q14194 572 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 PTGES3Q15185 160 aaKnown RBP22.18■■□□□ 1.14
U2AF1-203ENST00000398137 LRRC36Q1X8D7 754 aa22.18■■□□□ 1.14
U2AF1-203ENST00000398137 ZNF362Q5T0B9 420 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms